Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 RN7SL441P-201ENST00000492388 296 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC016559.2-201ENST00000510759 359 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC119751.1-201ENST00000513357 765 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AL390726.5-202ENST00000564800 256 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 UBE2FP2-201ENST00000566646 462 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AC087283.1-201ENST00000604029 1074 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 AP001521.2-201ENST00000608772 546 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 STMN1P1-201ENST00000617809 440 ntBASIC5.67□□□□□ -1.5
COL20A1Q9P218 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
COL20A1Q9P218 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
COL20A1Q9P218 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC012618.3-205ENST00000637896 1496 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC099654.2-201ENST00000433031 1980 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 RNA5SP443-201ENST00000363083 132 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 RN7SKP186-201ENST00000365371 303 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 Y_RNA.578-201ENST00000390903 88 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 LRRC37BP1-201ENST00000398851 714 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 RNA5SP113-201ENST00000410486 84 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 RN7SKP222-201ENST00000410651 315 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 RPL5P2-201ENST00000429598 854 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC022022.1-201ENST00000430304 178 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AL591719.1-201ENST00000444669 744 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 RPL7P48-201ENST00000461513 746 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC091180.1-201ENST00000462104 372 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 RPS29P22-201ENST00000472363 168 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC113420.1-201ENST00000507903 571 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC104108.1-201ENST00000509930 412 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC097486.1-201ENST00000515331 210 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 LRRC34P1-201ENST00000542742 915 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 BNIP3P1-201ENST00000547295 580 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC125494.3-201ENST00000602759 455 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AP000484.1-201ENST00000620067 1252 ntBASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
COL20A1Q9P218 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
COL20A1Q9P218 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
COL20A1Q9P218 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms