Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 MKKS-204ENST00000639674 192 ntBASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 AC011447.7-201ENST00000624228 1590 ntBASIC5.55□□□□□ -1.52
CCM2LQ9NUG4 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL353743.4-201ENST00000422653 1547 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RNU1-136P-201ENST00000384181 164 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 SNORA51.9-201ENST00000384295 124 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 SNORD116-23-201ENST00000384645 92 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP91-201ENST00000390902 119 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL096829.1-201ENST00000413677 457 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 MTND6P12-201ENST00000428247 522 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL035407.1-201ENST00000429211 571 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL513175.1-201ENST00000431492 780 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 MTCO3P11-201ENST00000455103 774 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RN7SL629P-201ENST00000489622 285 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC005178.1-201ENST00000508392 440 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC109481.1-201ENST00000509173 282 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 ATP1B1P1-201ENST00000509767 915 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 EIF3KP3-201ENST00000514461 639 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 MTCO1P30-201ENST00000515244 580 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RN7SKP31-201ENST00000516354 278 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 RNA5SP206-201ENST00000516703 121 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 MIR2117-201ENST00000516780 80 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 IGKV3D-25-201ENST00000519599 235 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AF279873.1-201ENST00000523393 313 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 ASB8-202ENST00000535055 657 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC079907.1-201ENST00000552707 374 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AP000811.1-201ENST00000603803 651 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC112220.3-201ENST00000605502 502 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL355816.1-201ENST00000607951 118 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC005962.2-201ENST00000611427 652 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 HULC.1-201ENST00000612720 240 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC096861.1-201ENST00000616652 240 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL445670.1-201ENST00000618889 801 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 FAM27E2-201ENST00000619668 403 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 Z69908.1-201ENST00000622603 247 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC091965.5-201ENST00000624785 342 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 CR392039.4-201ENST00000624968 501 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC099654.6-201ENST00000636487 512 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC002525.1-201ENST00000624392 1622 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 CPS1-IT1-201ENST00000628368 2306 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AL121839.2-201ENST00000565058 6943 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC010266.2-201ENST00000564741 3255 ntBASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
CCM2LQ9NUG4 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 MFSD8-239ENST00000641590 2479 ntBASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
CCM2LQ9NUG4 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms