Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 NOL8P1-201ENST00000508336 3529 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 RPS23P10-201ENST00000416185 486 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 GAPDHP49-201ENST00000421421 961 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 CHIAP3-201ENST00000423668 1133 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 AC016712.1-201ENST00000431088 378 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 EEF1A1P1-201ENST00000447052 739 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 AC009963.2-201ENST00000453431 138 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CISHQ9NSE2 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 AL359232.1-201ENST00000556361 442 ntTSL 3 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CISHQ9NSE2 AL023583.1-201ENST00000607518 1143 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 FAM27D1-201ENST00000612308 341 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 AC017104.4-201ENST00000636283 1592 ntBASIC4.55□□□□□ -1.68
CISHQ9NSE2 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CISHQ9NSE2 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CISHQ9NSE2 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CISHQ9NSE2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CISHQ9NSE2 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CISHQ9NSE2 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CISHQ9NSE2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CISHQ9NSE2 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 FAM3C2-201ENST00000312214 681 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 RNA5SP366-201ENST00000365454 123 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 C1orf194-204ENST00000369949 731 ntTSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC002524.1-201ENST00000411687 547 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC016397.1-201ENST00000412463 242 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC009220.1-201ENST00000451614 275 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 RPS20P4-201ENST00000461659 355 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 PGBD4P4-201ENST00000509673 613 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC027176.2-201ENST00000559166 746 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 AL390726.5-202ENST00000564800 256 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 AC011503.2-201ENST00000594230 1500 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 MTCO1P46-201ENST00000451639 1491 ntBASIC4.54□□□□□ -1.68
CISHQ9NSE2 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CISHQ9NSE2 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CISHQ9NSE2 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
CISHQ9NSE2 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CISHQ9NSE2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CISHQ9NSE2 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CISHQ9NSE2 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CISHQ9NSE2 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 MIR141-201ENST00000384975 95 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 RPL23AP26-201ENST00000412728 464 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 MAPRE1P3-201ENST00000435438 796 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 SERPINA7P1-201ENST00000443077 631 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 GEMIN8P3-201ENST00000445417 720 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 RPS29P19-201ENST00000479709 171 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AC091167.1-201ENST00000492017 396 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 ARL4AP1-201ENST00000503220 705 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 BNIP3P41-201ENST00000503774 571 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AC106806.2-201ENST00000509365 500 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CISHQ9NSE2 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 TVP23BP1-201ENST00000557500 617 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AC024267.4-202ENST00000582631 436 ntTSL 2 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 MIR3138-201ENST00000585238 82 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AF230666.2-201ENST00000602328 725 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AL161729.3-201ENST00000603533 673 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AL445423.1-201ENST00000609941 536 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 MIR7154-201ENST00000620673 73 ntBASIC4.53□□□□□ -1.68
CISHQ9NSE2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CISHQ9NSE2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CISHQ9NSE2 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.53□□□□□ -1.69
CISHQ9NSE2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms