Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 DNAJB5P1-201ENST00000454004 806 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 BX248409.1-201ENST00000455497 255 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 USP9YP25-201ENST00000457708 443 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC010468.1-201ENST00000461022 817 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 XACT-201ENST00000468762 497 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 NDUFA5P9-201ENST00000472609 340 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 TRBV8-2-201ENST00000475637 270 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC010486.2-201ENST00000505572 483 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 MTCO1P47-201ENST00000523889 1271 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 DUXAP6-201ENST00000553858 601 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC002400.1-201ENST00000569310 726 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 MIR3912-201ENST00000577566 105 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC022884.3-201ENST00000579571 248 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC090312.2-201ENST00000582687 378 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 AC009597.2-201ENST00000604659 592 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 TEX41-254ENST00000626394 423 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 NEK3-211ENST00000629912 141 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC6.01□□□□□ -1.45
VTA1Q9NP79 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 AL121839.2-201ENST00000565058 6943 ntBASIC6.01□□□□□ -1.45
VTA1Q9NP79 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
VTA1Q9NP79 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6□□□□□ -1.45
VTA1Q9NP79 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 AL353796.1-201ENST00000561542 3241 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 DNAJA1P3-201ENST00000399417 1194 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC6□□□□□ -1.45
VTA1Q9NP79 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6□□□□□ -1.45
VTA1Q9NP79 FLJ27354-202ENST00000443562 770 ntTSL 3 BASIC6□□□□□ -1.45
VTA1Q9NP79 AC058823.1-201ENST00000485315 474 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6□□□□□ -1.45
VTA1Q9NP79 AC118282.2-201ENST00000508739 374 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 ST13P12-201ENST00000508958 1094 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AC004980.4-201ENST00000513375 203 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC6□□□□□ -1.45
VTA1Q9NP79 IGHVII-44-2-201ENST00000517728 250 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC6□□□□□ -1.45
VTA1Q9NP79 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC6□□□□□ -1.45
VTA1Q9NP79 MIR5708-201ENST00000579723 85 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC6□□□□□ -1.45
VTA1Q9NP79 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC6□□□□□ -1.45
VTA1Q9NP79 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 AC009237.13-201ENST00000603193 276 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AC023509.5-201ENST00000617434 807 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AC135068.5-201ENST00000624197 983 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AL512506.2-201ENST00000624472 458 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 AC092608.3-201ENST00000625017 386 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 MTND5P31-201ENST00000419366 1374 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC6□□□□□ -1.45
VTA1Q9NP79 AC006042.3-201ENST00000454684 1469 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6□□□□□ -1.45
VTA1Q9NP79 AC068870.3-201ENST00000625077 2536 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC6□□□□□ -1.45
VTA1Q9NP79 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6□□□□□ -1.45
VTA1Q9NP79 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC6□□□□□ -1.45
VTA1Q9NP79 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
VTA1Q9NP79 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6□□□□□ -1.45
VTA1Q9NP79 AL355488.2-201ENST00000609909 2850 ntBASIC6□□□□□ -1.45
VTA1Q9NP79 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
VTA1Q9NP79 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 BX005019.1-201ENST00000561881 1810 ntBASIC5.99□□□□□ -1.45
VTA1Q9NP79 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
VTA1Q9NP79 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
VTA1Q9NP79 AC083899.1-201ENST00000454465 3819 ntBASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms