Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 AL096803.3-201ENST00000609032 532 ntBASIC5.22□□□□□ -1.57
EBF3Q9H4W6 AC010435.1-201ENST00000623353 1177 ntBASIC5.22□□□□□ -1.57
EBF3Q9H4W6 AL049536.1-201ENST00000625043 744 ntBASIC5.22□□□□□ -1.57
EBF3Q9H4W6 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 PCAT14-202ENST00000627127 3935 ntBASIC5.22□□□□□ -1.57
EBF3Q9H4W6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.22□□□□□ -1.57
EBF3Q9H4W6 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.57
EBF3Q9H4W6 STX3-208ENST00000641815 3236 ntBASIC5.21□□□□□ -1.57
EBF3Q9H4W6 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.21□□□□□ -1.57
EBF3Q9H4W6 OR10AB1P-202ENST00000641219 1686 ntBASIC5.21□□□□□ -1.57
EBF3Q9H4W6 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
EBF3Q9H4W6 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
EBF3Q9H4W6 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
EBF3Q9H4W6 AL450345.1-202ENST00000605741 3881 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 ANO6-205ENST00000441606 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RNA5SP223-201ENST00000365174 120 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 SNORA48.4-201ENST00000391089 134 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 EI24P3-201ENST00000399046 1062 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RN7SKP97-201ENST00000410966 333 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TRIM60P5Y-201ENST00000413946 574 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AF186996.5-201ENST00000418098 904 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC019050.1-201ENST00000418508 492 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TCEA1P2-201ENST00000420496 906 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RPL7P11-201ENST00000437586 658 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RAB9AP5-201ENST00000437794 597 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OR7E125P-201ENST00000443450 846 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RAB9AP2-201ENST00000443911 597 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC016772.1-201ENST00000444170 1261 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AL354714.3-201ENST00000447284 493 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TCEA1P1-201ENST00000449716 880 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC104849.1-201ENST00000462623 405 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RN7SL459P-201ENST00000481078 302 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC016687.1-201ENST00000482574 353 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RN7SL814P-201ENST00000487715 300 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 RPS12P31-201ENST00000491419 398 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 CEACAMP10-202ENST00000495431 496 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC138409.2-202ENST00000507274 458 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AL117351.2-201ENST00000513571 157 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 C1GALT1P1-201ENST00000548895 1089 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AL442163.2-201ENST00000553912 710 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OR4U1P-201ENST00000554958 912 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 UBE2FP2-201ENST00000566646 462 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC080013.3-201ENST00000606839 578 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC112503.1-201ENST00000608436 391 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC008759.3-201ENST00000613300 508 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 MIR8084-201ENST00000614105 89 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OR5AC4P-202ENST00000642086 985 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 AC017002.4-201ENST00000604721 1525 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 ZNF652P1-201ENST00000442420 1309 ntBASIC5.21□□□□□ -1.58
EBF3Q9H4W6 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
EBF3Q9H4W6 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 AC133552.1-201ENST00000569988 4007 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ERVFRD-3-201ENST00000578561 1617 ntBASIC5.2□□□□□ -1.58
EBF3Q9H4W6 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.2□□□□□ -1.58
EBF3Q9H4W6 NAMPTP1-201ENST00000440465 2514 ntBASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 112.4 ms