Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RNA5SP241-201ENST00000391326 114 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RPS3AP26-201ENST00000398259 784 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 OR7E101P-201ENST00000400428 513 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AL590084.2-201ENST00000401481 382 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RNU6-757P-201ENST00000410334 100 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 SDHDP6-201ENST00000414693 480 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC098592.1-201ENST00000419352 333 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC010153.1-201ENST00000432862 727 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 HMGB1P45-201ENST00000435986 653 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 GTF2IP7-202ENST00000436677 309 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RPL7P29-201ENST00000437151 728 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 ELOCP8-201ENST00000439309 332 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 ELOCP15-201ENST00000442090 332 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AL596266.1-201ENST00000448132 400 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC097262.1-201ENST00000452559 548 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AZGP1P2-201ENST00000454506 345 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RPL7P48-201ENST00000461513 746 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 RPL7P40-201ENST00000481703 745 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC009120.1-201ENST00000493458 473 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC111193.1-201ENST00000504097 155 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC021146.8-201ENST00000507455 733 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC116353.3-201ENST00000511215 249 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC092709.1-201ENST00000521355 1045 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 PMS2P3-207ENST00000529061 717 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 HSPE1P2-201ENST00000554777 306 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 MIR548Y-201ENST00000582739 110 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 EIF4A2P1-201ENST00000587313 1063 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC090607.5-201ENST00000615692 224 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 Z69908.1-201ENST00000622603 247 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC091965.5-201ENST00000624785 342 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC100871.1-201ENST00000507871 1456 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AL137100.1-201ENST00000556703 1620 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AP005901.5-201ENST00000545779 1796 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 AC107021.2-201ENST00000567714 2095 ntBASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
AMBRA1Q9C0C7 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RNU6-1339P-201ENST00000363574 91 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RNU6-553P-201ENST00000364047 96 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 Y_RNA.505-201ENST00000384489 102 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 U3.25-201ENST00000391209 220 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 GUCA1C-202ENST00000393963 900 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RNASE11-202ENST00000398009 1034 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL021407.1-201ENST00000404531 386 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RPS6P23-201ENST00000413224 722 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 LINC01881-201ENST00000416103 412 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL513325.1-201ENST00000417716 1034 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 CDY14P-201ENST00000431260 1014 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 ATP5F1P1-201ENST00000433775 569 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 HMGB3P10-201ENST00000434734 572 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RPL31P44-201ENST00000447680 377 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 CDY23P-201ENST00000451661 1014 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 OR52E3P-201ENST00000452083 936 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 MTCO2P18-201ENST00000457151 658 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RN7SL188P-201ENST00000469842 285 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 RN7SL273P-201ENST00000481561 299 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 ENPP7P11-201ENST00000505915 627 ntBASIC5.18□□□□□ -1.58
AMBRA1Q9C0C7 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms