Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC009084.2-201ENST00000624046 2810 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NDE1-201ENST00000396354 3221 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 METTL4-201ENST00000319888 3601 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LRMP-205ENST00000548766 2193 ntAPPRIS P2 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PPFIBP2-208ENST00000528883 2580 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DHX15-201ENST00000336812 2994 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 IRF5-213ENST00000489702 2988 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 KIZ-AS1-203ENST00000616177 5370 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL031595.3-201ENST00000624919 14262 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 WDR75-201ENST00000314761 2701 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MCM5-201ENST00000216122 3534 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 UTY-201ENST00000329134 4325 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 FAM196A-203ENST00000614311 4335 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF322-202ENST00000456172 4718 ntAPPRIS P1 TSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF322-207ENST00000607204 4737 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CX3CR1-205ENST00000541347 3255 ntAPPRIS P1 TSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 LINC00606-201ENST00000412578 2869 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PAH-201ENST00000307000 2466 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 NMT2-201ENST00000378150 2457 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MYEF2-202ENST00000324324 10360 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ANAPC5-208ENST00000535482 2077 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TMEM167A-201ENST00000502346 4630 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 C22orf15-201ENST00000305199 681 ntAPPRIS ALT2 TSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PRM3-201ENST00000327157 424 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DEFA3-201ENST00000327857 498 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP194-201ENST00000364662 113 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA5C-201ENST00000364902 137 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.332-201ENST00000365271 113 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-1241P-201ENST00000384536 107 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR577-201ENST00000385196 96 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MIR154-201ENST00000385243 84 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP213-201ENST00000391031 106 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNU6-269P-201ENST00000391077 97 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 REG3A-202ENST00000393878 1095 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 HBA1-202ENST00000397797 504 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TUBB8P2-201ENST00000402141 495 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 Y_RNA.609-201ENST00000410669 89 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 STSP1-201ENST00000412493 1151 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AP001043.1-203ENST00000415824 407 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL21P50-201ENST00000417698 477 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL450304.1-201ENST00000418657 759 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CELP-202ENST00000421286 1125 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC007362.1-208ENST00000423425 553 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC245452.4-201ENST00000423821 375 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL031667.2-201ENST00000423903 323 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 GAPDHP57-201ENST00000424400 585 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC024559.1-201ENST00000426616 566 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL365356.3-201ENST00000427341 657 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL23AP4-201ENST00000427757 463 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 EZH2P1-201ENST00000431167 291 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TEX41-205ENST00000431734 529 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC004938.1-201ENST00000438468 308 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PTMAP6-201ENST00000439110 327 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 DNM1P24-201ENST00000441091 490 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL590483.1-201ENST00000441338 468 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC093166.1-201ENST00000442243 330 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 MT1JP-201ENST00000444023 186 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL135924.1-201ENST00000446146 423 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 OGFRP1-203ENST00000446578 551 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL606462.1-201ENST00000447187 451 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL450471.1-201ENST00000447509 127 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 UBE2F-SCLY-201ENST00000449191 951 ntAPPRIS P5 TSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL23AP60-201ENST00000450011 454 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RBMY2TP-201ENST00000451162 947 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 USF1P1-201ENST00000451645 526 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 IGKV1D-27-201ENST00000453184 335 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC139887.1-201ENST00000454037 286 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CEACAM22P-203ENST00000455455 545 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 TRAF3IP2-AS1-207ENST00000456352 484 ntTSL 5 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AL121929.1-201ENST00000457120 524 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC018638.4-201ENST00000465971 1150 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RPL23AP70-201ENST00000483361 460 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC078817.1-201ENST00000492623 435 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SL167P-201ENST00000498381 302 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 OR7E94P-201ENST00000502331 374 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC020893.1-201ENST00000502452 580 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 PRR7-AS1-203ENST00000511565 502 ntTSL 3 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC024581.1-201ENST00000514791 566 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORD77.4-201ENST00000516158 81 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RNA5SP236-201ENST00000516169 116 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ACA64.6-201ENST00000516310 117 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA18.7-201ENST00000516910 131 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 SNORA74.3-201ENST00000517108 154 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 RN7SKP258-201ENST00000517151 304 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 BRF2-203ENST00000521170 550 ntTSL 4 BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 ERHP1-201ENST00000523006 310 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC091980.1-201ENST00000524262 288 ntBASIC1.88□□□□□ -2.11
KRTAP4-4Q9BYR3 AC084337.1-201ENST00000524809 686 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 115.8 ms