Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 FO393419.3-201ENST00000428741 282 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC093716.1-201ENST00000435923 377 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 MED28P3-201ENST00000444288 531 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AL606662.1-201ENST00000445763 553 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 OR7E116P-201ENST00000448529 957 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 OR52J1P-201ENST00000450596 932 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AL035407.2-201ENST00000454090 378 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC011225.1-201ENST00000457751 369 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 SYPL1P1-201ENST00000473622 768 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC073610.1-201ENST00000489971 396 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC084024.2-201ENST00000503480 791 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 NDUFA5P12-201ENST00000503796 343 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 HIGD1AP14-201ENST00000507617 282 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 CYP4F27P-201ENST00000514557 494 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 PRELID3BP4-201ENST00000515476 571 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 BX510359.5-201ENST00000515651 304 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 IGLV3-24-201ENST00000517477 197 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 MTCO1P40-201ENST00000574371 625 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 SUMO2P15-201ENST00000604285 278 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC245297.2-201ENST00000610119 565 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AL133243.1-201ENST00000614487 366 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AP002505.2-201ENST00000623585 696 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC132068.1-201ENST00000623805 459 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC099654.6-201ENST00000636487 512 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC092104.1-201ENST00000497346 1441 ntBASIC5.38□□□□□ -1.55
RNF31Q96EP0 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
RNF31Q96EP0 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.38□□□□□ -1.55
RNF31Q96EP0 AC073055.1-201ENST00000456901 1621 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF31Q96EP0 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF31Q96EP0 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF31Q96EP0 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF31Q96EP0 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 RNA5SP319-201ENST00000362768 119 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 RNU1-19P-201ENST00000363306 165 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 MIR142-201ENST00000384835 87 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 AL590084.2-201ENST00000401481 382 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 SPTLC1P2-201ENST00000407089 121 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 AL590806.1-201ENST00000415818 853 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC01881-201ENST00000416103 412 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 MTCO1P21-201ENST00000416634 589 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 YWHAEP5-201ENST00000431545 765 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 MTCYBP3-201ENST00000445588 1137 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC02541-202ENST00000452675 465 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 CALM1P2-201ENST00000452941 448 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC00888-204ENST00000487386 421 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 AC105384.2-201ENST00000508433 640 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 MTND3P5-201ENST00000512798 333 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 HIGD1AP18-201ENST00000520730 278 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 ZDHHC20P3-201ENST00000531576 336 ntBASIC5.37□□□□□ -1.55
RNF31Q96EP0 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
RNF31Q96EP0 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC5.37□□□□□ -1.55
RNF31Q96EP0 IGBP1P1-201ENST00000554337 1009 ntBASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms