Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC122134.1-201ENST00000565664 1104 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 MIR4443-201ENST00000585052 53 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 SUMO2P14-201ENST00000604488 293 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC034236.3-201ENST00000605999 461 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL627230.1-201ENST00000613077 211 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL591926.8-201ENST00000616876 211 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC234782.5-201ENST00000617723 324 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL022401.1-201ENST00000619498 108 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC018445.2-201ENST00000622987 260 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 OR4G3P-201ENST00000633500 913 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC093775.1-201ENST00000624154 1868 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL445487.1-201ENST00000415694 1580 ntBASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SLC44A1Q8WWI5 AL672167.1-203ENST00000641299 2975 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 SMG1P6-201ENST00000532337 2930 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC005332.5-201ENST00000591222 2919 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 MIR122-201ENST00000385044 85 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RPL22P22-201ENST00000395439 379 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 HMGB3P19-201ENST00000403971 560 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RN7SKP199-201ENST00000410325 305 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AL451139.1-201ENST00000434718 346 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 CNOT7P2-201ENST00000441051 832 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RPL6P5-201ENST00000445678 828 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AURKAPS1-201ENST00000451805 1212 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC005532.2-201ENST00000467154 373 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC079841.1-201ENST00000481228 950 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RPL21P47-201ENST00000483696 477 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 OR5H3P-201ENST00000502817 919 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RNA5SP360-201ENST00000516555 118 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RNA5SP392-201ENST00000516905 112 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 BUD31P1-201ENST00000521828 359 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC104115.2-201ENST00000523026 687 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 FKBP1BP1-201ENST00000553366 325 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC018552.1-201ENST00000562099 811 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 MIR4675-201ENST00000577898 77 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC010424.2-201ENST00000607594 443 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AL121890.2-201ENST00000617644 465 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AP003485.1-201ENST00000625093 753 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 OR51H2P-202ENST00000641424 3046 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AL645568.2-201ENST00000432815 1337 ntBASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.86□□□□□ -1.63
SLC44A1Q8WWI5 AL121950.1-201ENST00000624993 2077 ntBASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 RNU6-468P-201ENST00000384003 109 ntBASIC4.85□□□□□ -1.63
SLC44A1Q8WWI5 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 78.4 ms