Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 AC006386.1-201ENST00000619436 415 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 MIR6810-201ENST00000622701 70 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.22□□□□□ -1.57
HMGB4Q8WW32 SEPT7P7-201ENST00000420492 1301 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 AL355578.1-201ENST00000607405 1328 ntBASIC5.22□□□□□ -1.57
HMGB4Q8WW32 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.57
HMGB4Q8WW32 NSRP1P1-201ENST00000444067 1693 ntBASIC5.21□□□□□ -1.57
HMGB4Q8WW32 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
HMGB4Q8WW32 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.21□□□□□ -1.57
HMGB4Q8WW32 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.21□□□□□ -1.57
HMGB4Q8WW32 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.21□□□□□ -1.57
HMGB4Q8WW32 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC004158.1-201ENST00000564508 4319 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 RNA5SP453-201ENST00000362503 119 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 MTCO1P56-201ENST00000401674 224 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AL021331.1-201ENST00000402817 582 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 BTF3P8-201ENST00000414577 526 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 MTCYBP15-201ENST00000433123 1127 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC002542.1-201ENST00000440683 193 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 RPL34P20-201ENST00000442771 351 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 VN1R25P-201ENST00000443385 738 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 MTCO3P35-201ENST00000485582 781 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 RN7SL244P-201ENST00000493405 297 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 CEACAMP10-202ENST00000495431 496 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC091912.1-201ENST00000511351 248 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 OR7H2P-201ENST00000513483 306 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC097486.1-201ENST00000515331 210 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC009117.1-201ENST00000563948 554 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 CYP2C60P-201ENST00000566088 139 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 CLIC4P2-201ENST00000601934 717 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC009237.13-201ENST00000603193 276 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC093424.1-201ENST00000604999 338 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC087683.2-201ENST00000611384 326 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 RNF6P1-201ENST00000444889 1784 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 AL355488.2-201ENST00000609909 2850 ntBASIC5.21□□□□□ -1.58
HMGB4Q8WW32 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
HMGB4Q8WW32 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC007618.1-201ENST00000366455 732 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 ADIG-201ENST00000373348 430 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 RNA5SP87-201ENST00000384155 118 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 Y_RNA.578-201ENST00000390903 88 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC013442.1-201ENST00000397347 228 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AC005002.1-201ENST00000447458 540 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 ZNF886P-201ENST00000450781 723 ntBASIC5.2□□□□□ -1.58
HMGB4Q8WW32 AL160408.1-203ENST00000453568 631 ntTSL 5 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms