Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AL356121.2-201ENST00000624715 780 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC090220.1-201ENST00000593078 1699 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 HSPD1P14-201ENST00000432666 1618 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP509-201ENST00000364577 119 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP22-201ENST00000365393 109 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL022722.2-201ENST00000402519 180 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 DNAJA1P1-201ENST00000425106 1187 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL691449.1-201ENST00000426570 421 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CDY14P-201ENST00000431260 1014 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 FTH1P16-201ENST00000435241 552 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 RPL23AP52-201ENST00000439311 478 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CDY12P-201ENST00000440679 1015 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CDY13P-201ENST00000445813 1015 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 NUTF2P3-201ENST00000448540 384 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 CDY23P-201ENST00000451661 1014 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AP001439.1-201ENST00000455275 392 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 SNORA59A-201ENST00000459326 152 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC104164.2-201ENST00000496953 495 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC093524.1-201ENST00000564266 1094 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 OR51C1P-201ENST00000608504 942 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 AC007546.1-201ENST00000619452 559 ntBASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
SHROOM3Q8TF72 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AC139769.1-204ENST00000472297 1931 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 Y_RNA.333-201ENST00000365274 102 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP372-201ENST00000390836 115 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 CASKP1-201ENST00000412870 582 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AL358176.3-201ENST00000420757 454 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 GCA-203ENST00000429691 824 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AC024220.1-201ENST00000603675 484 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 ARF4P1-201ENST00000605447 541 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AL133243.1-201ENST00000614487 366 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AC140479.6-201ENST00000633535 357 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 AL627171.1-201ENST00000618845 1308 ntBASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SHROOM3Q8TF72 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 KCNJ13-201ENST00000233826 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 MIR383-201ENST00000362257 73 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RN7SKP280-201ENST00000364196 304 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AL672167.2-201ENST00000377164 879 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 MIR670-201ENST00000390142 98 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 SNORA11.1-201ENST00000408133 129 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP317-201ENST00000410176 116 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 SNORA74C-2-201ENST00000411179 201 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP311-201ENST00000411290 116 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 ARAFP1-201ENST00000422172 605 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPS29P17-201ENST00000430795 166 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 ARL4AP4-201ENST00000434170 518 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPL7P33-201ENST00000444159 742 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 DHFRP3-201ENST00000455595 559 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 snoU13.24-201ENST00000458998 104 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP315-201ENST00000516340 116 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RNA5SP312-201ENST00000517068 116 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 MRPL49P2-201ENST00000521066 465 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 RPL7P50-201ENST00000600588 727 ntBASIC4.49□□□□□ -1.69
SHROOM3Q8TF72 BNIP3P19-201ENST00000605397 577 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 107.2 ms