Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC091564.1-201ENST00000464563 479 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 RNU4ATAC18P-201ENST00000516179 126 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC233702.9-201ENST00000581528 203 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 RNU1-20P-201ENST00000363314 162 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 RN7SKP177-201ENST00000410567 355 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 UBE2V1P3-201ENST00000439651 417 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC004980.3-201ENST00000447046 365 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 RNA5SP246-201ENST00000458909 119 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 PSAT1P4-201ENST00000466500 526 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 BBX-203ENST00000402543 3980 ntTSL 5 BASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 AC139769.1-204ENST00000472297 1931 ntBASIC2.95□□□□□ -1.94
ALMS1Q8TCU4 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AL035696.2-201ENST00000407941 709 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC115285.1-201ENST00000424879 736 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 CREM-220ENST00000463314 964 ntTSL 2 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC138832.1-201ENST00000522871 556 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC087477.6-201ENST00000559595 843 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 Z98200.1-201ENST00000607298 470 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AP005019.3-201ENST00000620418 560 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC015804.1-201ENST00000622935 435 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC010168.2-201ENST00000562691 5428 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RHEBP2-201ENST00000450289 600 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RPS27AP17-201ENST00000463344 455 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AL592156.1-201ENST00000508758 304 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 MGP-201ENST00000228938 694 ntTSL 3 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RNA5SP307-201ENST00000362863 116 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RN7SKP97-201ENST00000410966 333 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 Z92545.1-201ENST00000411782 234 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RPS20P14-201ENST00000412545 360 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 RPL6P29-201ENST00000414863 865 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AL157831.1-201ENST00000426134 473 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 ENSA-211ENST00000503345 793 ntTSL 3 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC011471.1-201ENST00000585766 187 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 AC096553.1-201ENST00000605169 829 ntBASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
ALMS1Q8TCU4 MIR3065-201ENST00000390137 79 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 IL6-203ENST00000401651 539 ntTSL 2 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 TPT1P2-201ENST00000413105 503 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC013429.2-201ENST00000418798 781 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 CDY14P-201ENST00000431260 1014 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 CDY12P-201ENST00000440679 1015 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 NOTCH2P1-201ENST00000443481 624 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 CDY13P-201ENST00000445813 1015 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 CDY23P-201ENST00000451661 1014 ntBASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 PAIP2B-201ENST00000244221 6279 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
ALMS1Q8TCU4 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 119 ms