Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 RPS27AP7-201ENST00000422792 455 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC007161.1-204ENST00000423039 460 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 RPL12P17-201ENST00000432393 498 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 ATP6V0E1P2-201ENST00000441771 245 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC069528.1-202ENST00000482888 637 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC011037.1-201ENST00000483964 558 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC083829.1-201ENST00000503756 657 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 SUMO2P4-201ENST00000504193 276 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC008565.1-201ENST00000509046 885 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 RNU6-1004P-201ENST00000516584 111 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 ATP5F1P7-201ENST00000567330 760 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC008088.1-201ENST00000580993 280 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC007349.4-201ENST00000608114 532 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC013468.1-201ENST00000608680 598 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 MLECP1-201ENST00000615893 709 ntBASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.36□□□□□ -1.39
SMC1BQ8NDV3 ZNF876P-202ENST00000398732 1485 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL354733.2-209ENST00000589233 1434 ntTSL 2 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 RNU6-666P-201ENST00000363499 107 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 RNA5SP515-201ENST00000364570 118 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 RN7SKP263-201ENST00000411194 309 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 RNA5SP498-201ENST00000411342 120 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 VTA1P1-201ENST00000414044 866 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 RPL7P57-201ENST00000423238 740 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 VN1R21P-201ENST00000426703 765 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL359265.2-201ENST00000434367 631 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 HMGB3P10-201ENST00000434734 572 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 MTCYBP42-201ENST00000444653 1130 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 OR52J1P-201ENST00000450596 932 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC034244.1-201ENST00000507687 207 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 DEFB130C-202ENST00000530001 230 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 MTCO2P15-201ENST00000532655 656 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 YWHABP2-201ENST00000540201 713 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL121594.2-201ENST00000541658 472 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 ZNF321P-202ENST00000550843 495 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC084824.1-201ENST00000550917 1005 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL109766.1-201ENST00000555080 552 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC009094.1-201ENST00000564443 426 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 CYP2C60P-201ENST00000566088 139 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC095057.3-201ENST00000567102 1157 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 LSM1P2-201ENST00000604911 322 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC011472.4-201ENST00000615848 491 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC109454.4-201ENST00000623411 649 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 ZBTB44-210ENST00000530205 2179 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 MFSD8-239ENST00000641590 2479 ntBASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMC1BQ8NDV3 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AL359837.1-201ENST00000381357 287 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 RNU6-1242P-201ENST00000391052 103 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 CASP3-203ENST00000393588 677 ntTSL 4 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC234781.4-201ENST00000419384 244 ntBASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC6.34□□□□□ -1.39
SMC1BQ8NDV3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms