Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNA5SP223-201ENST00000365174 120 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC007618.1-201ENST00000366455 732 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 SNORA66-201ENST00000384792 133 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RPL21P67-201ENST00000402896 478 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 TCEA1P4-201ENST00000415066 844 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 Z80107.2-201ENST00000445127 392 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AL035407.2-201ENST00000454090 378 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AL133244.1-201ENST00000456007 258 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RNU7-27P-201ENST00000459281 62 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RPS4XP6-201ENST00000477670 797 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RN7SL814P-201ENST00000487715 300 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 RN7SL244P-201ENST00000493405 297 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC097173.1-201ENST00000505862 819 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 COX6B1P5-201ENST00000509843 249 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 SNORA19.3-201ENST00000516165 130 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC025260.1-201ENST00000548858 430 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 PCNPP1-201ENST00000552501 511 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 MIR4480-201ENST00000582492 71 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC006116.5-201ENST00000591936 559 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 Z82195.1-201ENST00000604558 398 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC087783.2-201ENST00000605070 562 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC005084.1-201ENST00000605160 304 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC013244.3-201ENST00000605614 388 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC096586.1-201ENST00000610267 561 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 BNIP3P41-202ENST00000616656 861 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC091953.3-201ENST00000623220 236 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 ZNRD1ASP-221ENST00000637794 1074 ntBASIC4.71□□□□□ -1.66
BEST3Q8N1M1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
BEST3Q8N1M1 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 TRIM51GP-201ENST00000534741 1350 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 OBSCN-210ENST00000570156 26925 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 EI24P3-201ENST00000399046 1062 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 DNAJC19P6-201ENST00000401853 280 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 RPL37P18-201ENST00000411602 243 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 RPS3AP25-201ENST00000411660 793 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC013404.1-201ENST00000413068 249 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 COX6B1P1-201ENST00000415962 213 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CHEK2P3-201ENST00000416118 248 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 TEX41-203ENST00000420472 765 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 HSPD1P12-201ENST00000429127 1069 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 MTCO1P53-201ENST00000441633 699 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC073648.4-201ENST00000442655 781 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL358794.1-201ENST00000445689 381 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 RPL31P44-201ENST00000447680 377 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 EXOSC3P1-201ENST00000448649 500 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 RN7SL443P-201ENST00000464331 290 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC021660.1-201ENST00000465006 554 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC140172.1-201ENST00000502928 141 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC016559.2-201ENST00000510759 359 ntBASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC4.7□□□□□ -1.66
BEST3Q8N1M1 AC091163.3-201ENST00000518269 1144 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 183.8 ms