Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AP001324.1-201ENST00000428553 399 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 SKP1P3-201ENST00000429280 487 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 ARL6IP1P2-201ENST00000431356 563 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AL359265.2-201ENST00000434367 631 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AL353597.2-202ENST00000434901 373 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 EIF4A1P11-201ENST00000451239 222 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC010326.1-201ENST00000462726 602 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 RPS26P28-201ENST00000470806 348 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 RN7SL826P-201ENST00000479724 288 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 TRBV8-1-201ENST00000481590 279 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 THUMPD3-AS1-210ENST00000519043 1115 ntTSL 3 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AP001781.1-201ENST00000530977 207 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 MIR4270-201ENST00000581799 70 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC090948.2-201ENST00000607363 564 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC020634.1-201ENST00000608701 549 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 AC091953.3-201ENST00000623220 236 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 HSPD1P11-201ENST00000508643 1702 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
CDKL3Q8IVW4 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC105074.1-201ENST00000623380 3095 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC067945.1-201ENST00000342609 618 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 RPS20P14-201ENST00000412545 360 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AL590762.4-201ENST00000425885 253 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AL162388.1-201ENST00000450912 352 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 CEACAMP6-201ENST00000452007 574 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 OR52Y1P-201ENST00000452418 828 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 MTND6P32-201ENST00000457611 483 ntBASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 MEG8-217ENST00000556637 924 ntTSL 5 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CDKL3Q8IVW4 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 SNORD113.2-201ENST00000364166 89 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 RPS20P1-201ENST00000434853 354 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 UBE2V1P3-201ENST00000439651 417 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC011753.3-201ENST00000443436 406 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC105233.1-201ENST00000498840 781 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC002456.2-201ENST00000509356 380 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC068446.3-201ENST00000555285 382 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AL121834.1-201ENST00000572284 509 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 AL049539.1-201ENST00000611964 459 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 MIR7154-201ENST00000620673 73 ntBASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CDKL3Q8IVW4 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CDKL3Q8IVW4 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 92 ms