Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 SNORA74C-2-201ENST00000411179 201 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AL356968.2-201ENST00000412769 1257 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 EIF4HP2-201ENST00000424380 563 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 OR52E3P-201ENST00000452083 936 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 RPS29P2-201ENST00000479278 136 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 SRGNP1-201ENST00000603392 451 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 EED-206ENST00000527888 1422 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 MR1-208ENST00000614012 7860 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 DNM1P47-203ENST00000571780 12667 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 ZNF107-204ENST00000423627 5773 ntTSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 RN7SKP167-201ENST00000411047 285 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 MRPL48P1-201ENST00000445390 636 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC012671.1-201ENST00000451912 203 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 RN7SKP157-201ENST00000516174 282 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 AC027455.1-201ENST00000574104 594 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC2.94□□□□□ -1.94
CSMD3Q7Z407 MIR6852-201ENST00000621699 66 ntBASIC2.94□□□□□ -1.94
CSMD3Q7Z407 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 RN7SKP159-201ENST00000410657 292 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AP002360.3-201ENST00000607673 710 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC010608.2-201ENST00000624830 470 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC104260.2-201ENST00000623551 3497 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 KIAA1024-201ENST00000305428 6732 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 MFN1-205ENST00000471841 5224 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC093166.2-201ENST00000455969 1017 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 RPL37P3-201ENST00000456825 293 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC108145.1-201ENST00000503770 153 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC092354.2-201ENST00000607786 514 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 LINC01808-202ENST00000641680 1116 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 MAPK10-372ENST00000641954 3413 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 ZRANB3-202ENST00000401392 6820 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 OR8F1P-201ENST00000425243 930 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 NPM1P18-201ENST00000434232 732 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AF213884.1-201ENST00000488102 463 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AC010487.1-201ENST00000594408 1172 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.93□□□□□ -1.94
CSMD3Q7Z407 AL022323.4-201ENST00000623980 13120 ntBASIC2.93□□□□□ -1.94
CSMD3Q7Z407 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 THAP12P5-201ENST00000405864 2275 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 HNRNPA1P29-201ENST00000426409 879 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 RPL35AP21-201ENST00000437667 333 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 BTF3P6-201ENST00000448054 499 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 GAPDHP36-201ENST00000480688 918 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 AC005034.4-201ENST00000603612 899 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 ELOCP35-201ENST00000604289 336 ntBASIC2.92□□□□□ -1.94
CSMD3Q7Z407 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC2.92□□□□□ -1.94
CSMD3Q7Z407 PACRG-211ENST00000621363 360 ntTSL 5 BASIC2.92□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms