Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MTND3P3-201ENST00000505004 126 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC147055.3-201ENST00000510547 851 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC013701.1-201ENST00000522657 465 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC092490.3-201ENST00000545370 572 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC074031.1-201ENST00000550634 734 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MIR4458-201ENST00000578872 75 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC233702.9-201ENST00000581528 203 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MTATP6P2-201ENST00000603319 678 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC013244.1-201ENST00000604279 193 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 BNIP3P35-201ENST00000604530 490 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC108359.1-201ENST00000616451 1211 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AP000943.4-201ENST00000622912 357 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 LINC01338-201ENST00000627179 632 ntTSL 3 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MIR6715B-201ENST00000637172 77 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 LINC01739-205ENST00000641890 573 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC022031.1-201ENST00000585985 2593 ntBASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.72□□□□□ -1.65
NUP54Q7Z3B4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.71□□□□□ -1.65
NUP54Q7Z3B4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.71□□□□□ -1.65
NUP54Q7Z3B4 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RNA5SP305-201ENST00000362665 119 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RNA5SP507-201ENST00000363603 121 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RN7SKP213-201ENST00000410746 298 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC010385.1-201ENST00000412374 256 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RPL23AP27-201ENST00000415161 451 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 VN1R42P-201ENST00000424651 344 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 IPMKP1-201ENST00000425988 855 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 COX6CP13-201ENST00000428703 226 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 FO393419.3-201ENST00000428741 282 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 TRAPPC2P9-201ENST00000434556 343 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 ACTR3P2-201ENST00000439585 1257 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 CEACAMP7-201ENST00000444105 496 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC004980.3-201ENST00000447046 365 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RPSAP50-201ENST00000481955 852 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC004815.1-201ENST00000484185 331 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 COX6B1P2-201ENST00000489624 230 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RN7SL244P-201ENST00000493405 297 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC073073.1-201ENST00000493920 463 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 SNORA31.13-201ENST00000516624 135 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RN7SKP82-201ENST00000516786 223 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 IGKV2-36-201ENST00000519999 223 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 HMGN2P6-201ENST00000551091 273 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AL161713.1-201ENST00000555538 145 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 MIR3691-201ENST00000578066 90 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 HMGB2P1-201ENST00000591146 634 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 Z98949.1-211ENST00000596813 773 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC092953.2-201ENST00000608000 699 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 OR6R2P-201ENST00000609216 300 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 RPSAP73-201ENST00000614820 330 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 AC090229.1-201ENST00000590983 1609 ntBASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
NUP54Q7Z3B4 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms