Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 SNORA62.2-201ENST00000364672 152 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 ARL4AP5-201ENST00000404372 599 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AL080315.1-201ENST00000406055 466 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 RNA5SP345-201ENST00000410646 108 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 COX6B1P1-201ENST00000415962 213 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AL451139.1-201ENST00000434718 346 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 PSMD10P3-201ENST00000437000 448 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 RPL7P61-201ENST00000451721 751 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 MTND6P6-201ENST00000478031 263 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 DEFB109F-201ENST00000491870 277 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC104971.1-201ENST00000495117 578 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 NDUFA5P12-201ENST00000503796 343 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 NDUFB5P1-201ENST00000508134 564 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 OR5AZ1P-201ENST00000527448 943 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC021006.3-201ENST00000530771 192 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 GCSHP4-201ENST00000538792 439 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC008033.2-201ENST00000542626 177 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 EDDM3DP-201ENST00000554692 434 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC090312.1-201ENST00000580637 348 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC110743.1-201ENST00000584870 478 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC005242.1-201ENST00000585658 438 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC025175.1-201ENST00000606482 759 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC010424.2-201ENST00000607594 443 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC133644.2-201ENST00000608142 540 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC005086.4-201ENST00000623065 213 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC015726.3-201ENST00000624501 418 ntBASIC4.32□□□□□ -1.72
NIPAL3Q6P499 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
NIPAL3Q6P499 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 SAMMSON-226ENST00000642089 1582 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC108751.5-201ENST00000492880 1336 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 SNORD115-48-201ENST00000364764 76 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC019155.1-201ENST00000382242 574 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 TMX2P1-201ENST00000436507 708 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AL031663.1-201ENST00000437445 219 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 ARL4AP3-201ENST00000441452 574 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 GEMIN8P3-201ENST00000445417 720 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 MTND5P8-201ENST00000449817 1083 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC239809.1-201ENST00000450470 217 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 RPL23AP56-201ENST00000460778 453 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC093270.2-201ENST00000486157 792 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 GAPDHP56-201ENST00000506031 988 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 RNA5SP392-201ENST00000516905 112 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 MORF4L1P3-201ENST00000525966 950 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 FKBP1BP1-201ENST00000553366 325 ntBASIC4.31□□□□□ -1.72
NIPAL3Q6P499 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.31□□□□□ -1.72
NIPAL3Q6P499 AC068446.3-201ENST00000555285 382 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms