Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 RNA5SP428-201ENST00000365129 132 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 RNU6-146P-201ENST00000384602 108 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 ZNF603P-201ENST00000405613 487 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC019050.1-201ENST00000418508 492 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AL450023.3-201ENST00000440592 271 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 HMGN1P8-201ENST00000463578 288 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 PPIAP21-201ENST00000464473 501 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 RPL7AP6-201ENST00000477943 801 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC140172.1-201ENST00000502928 141 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC008638.1-201ENST00000506035 866 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 RNU2-30P-201ENST00000516209 141 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 RNA5SP43-201ENST00000516559 110 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 IGLV3-26-201ENST00000520756 302 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC007424.1-203ENST00000554613 687 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC116553.2-201ENST00000564203 463 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 MIR4691-201ENST00000583764 85 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC087783.2-201ENST00000605070 562 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 AC106871.1-201ENST00000568324 3102 ntBASIC4.35□□□□□ -1.71
TMEM53Q6P2H8 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 SNORA70-201ENST00000384436 135 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 RNA5SP239-201ENST00000410218 129 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 RN7SKP222-201ENST00000410651 315 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC006065.1-201ENST00000422539 802 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 RPL12P34-201ENST00000424532 479 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 YWHAEP5-201ENST00000431545 765 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC092162.1-201ENST00000432828 434 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 MAPRE1P3-201ENST00000435438 796 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 PPIAP17-201ENST00000438507 471 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 HIGD1AP8-201ENST00000453927 274 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 OR7L1P-201ENST00000456181 380 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 RNU6-1218P-201ENST00000458990 108 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC090142.2-201ENST00000483263 416 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 Y_RNA.719-201ENST00000517156 106 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 RGS5-219ENST00000528019 512 ntTSL 4 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 CYCSP28-201ENST00000534284 321 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC092851.1-201ENST00000535964 478 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 NPM1P45-201ENST00000583151 559 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 MTCO2P22-201ENST00000603246 681 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC013244.1-201ENST00000604279 193 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC090953.1-201ENST00000604305 1092 ntBASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.34□□□□□ -1.71
TMEM53Q6P2H8 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms