Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC2.8□□□□□ -1.96
VPS13DQ5THJ4 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 ENSAP1-201ENST00000392855 326 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AL035696.2-201ENST00000407941 709 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 YPEL5P3-201ENST00000547227 352 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 HYDIN-206ENST00000393567 15719 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 UBE2Q2P12-201ENST00000414573 204 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 BNIP3P41-201ENST00000503774 571 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC005412.1-201ENST00000580812 1049 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AL354798.1-201ENST00000622505 329 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 CASC19-261ENST00000641853 1638 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 NHLRC2-201ENST00000369301 11051 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 OR52E6-202ENST00000379946 954 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AL050321.1-201ENST00000432363 400 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 CEACAMP1-201ENST00000434624 1035 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 Z74696.2-201ENST00000436514 498 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 RANP9-201ENST00000519957 271 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AL159987.2-201ENST00000432754 307 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 ACTR3P3-201ENST00000480448 893 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AP000563.1-201ENST00000490865 758 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 DUXAP2-201ENST00000519198 589 ntBASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC2.79□□□□□ -1.96
VPS13DQ5THJ4 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 OR6K3-202ENST00000368146 996 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 PDSS1P1-201ENST00000422953 1114 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 CYCSP32-201ENST00000440548 321 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 SERPINA7P1-201ENST00000443077 631 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 EIF4A2P1-201ENST00000587313 1063 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC007390.2-201ENST00000606229 3803 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 ZNF605-202ENST00000360187 9340 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 ACEA_U3.1-201ENST00000363057 217 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 SNORA5A-201ENST00000384111 134 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 RNU4-6P-201ENST00000410804 122 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 RPL7P4-203ENST00000430239 730 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC104306.1-201ENST00000449702 371 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC093853.1-201ENST00000515689 483 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AL359219.2-201ENST00000555184 348 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC090912.3-201ENST00000609775 533 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC012314.7-201ENST00000619693 93 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 EED-206ENST00000527888 1422 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 RNU6-1279P-201ENST00000383917 103 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC007066.1-201ENST00000392902 381 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 GTF3AP5-201ENST00000442645 697 ntBASIC2.78□□□□□ -1.96
VPS13DQ5THJ4 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC2.78□□□□□ -1.96
Retrieved 100 of 98,524 protein–RNA pairs in 123.6 ms