Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SNAPC4Q5SXM2 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 RNU1-20P-201ENST00000363314 162 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 RPS21P8-201ENST00000413365 247 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AC090589.1-201ENST00000473109 362 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 RNU6-352P-201ENST00000516908 107 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 ZNF415P1-201ENST00000582279 1166 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AC010201.1-201ENST00000605051 540 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 AC105074.1-201ENST00000623380 3095 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 ZNF285B-201ENST00000561698 1767 ntBASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC6.99□□□□□ -1.29
SNAPC4Q5SXM2 NAP1L4P1-201ENST00000319092 1157 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 MIR133A2-201ENST00000347538 102 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AP000907.1-201ENST00000428428 510 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AC104164.2-201ENST00000496953 495 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 DUXAP2-201ENST00000519198 589 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 OR2BH1P-201ENST00000608850 864 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 USP9YP4-201ENST00000424401 1745 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ACEA_U3.1-201ENST00000363057 217 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 RNA5SP175-201ENST00000364275 119 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AC007068.1-201ENST00000396690 844 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 EI24P3-201ENST00000399046 1062 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 PLGLA-201ENST00000465668 449 ntBASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 G2E3-AS1-201ENST00000548631 579 ntTSL 3 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC6.98□□□□□ -1.29
SNAPC4Q5SXM2 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 PPP1R9A-201ENST00000289495 3983 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 AC073346.2-201ENST00000624724 2058 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 A2MP1-204ENST00000566278 4130 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 OR4A15-201ENST00000314706 1035 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 MIR634-201ENST00000385208 97 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 RN7SKP177-201ENST00000410567 355 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CDY14P-201ENST00000431260 1014 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CDY12P-201ENST00000440679 1015 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 SERPINA7P1-201ENST00000443077 631 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CDY13P-201ENST00000445813 1015 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CDY23P-201ENST00000451661 1014 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 RN7SKP83-201ENST00000516512 178 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 SOD1P3-201ENST00000518682 454 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 IGKV2D-19-201ENST00000523346 262 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 AL159169.3-201ENST00000608871 561 ntBASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
SNAPC4Q5SXM2 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SNAPC4Q5SXM2 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.29
SNAPC4Q5SXM2 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC6.96□□□□□ -1.29
SNAPC4Q5SXM2 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC6.96□□□□□ -1.29
SNAPC4Q5SXM2 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
SNAPC4Q5SXM2 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.96□□□□□ -1.3
SNAPC4Q5SXM2 EED-206ENST00000527888 1422 ntTSL 2 BASIC6.96□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms