Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 RNA5SP234-201ENST00000363916 119 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 SNORA5.1-201ENST00000384275 131 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 MIR217-201ENST00000384817 110 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC009804.1-201ENST00000400949 179 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 GAPDHP42-201ENST00000406848 981 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 NRBF2P2-201ENST00000413087 861 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RPL7P53-201ENST00000421245 739 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 Z93242.1-201ENST00000427102 353 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RPL23AP76-201ENST00000441860 458 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC023271.1-201ENST00000445936 1090 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RFC5P1-201ENST00000454419 874 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC006511.1-201ENST00000470614 315 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC104689.1-201ENST00000473356 768 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RN7SL570P-201ENST00000484405 292 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RPS3AP22-201ENST00000488297 769 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RN7SL30P-201ENST00000488416 306 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 WBP1LP4-201ENST00000505043 344 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC010486.2-201ENST00000505572 483 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 OR5H4P-201ENST00000510851 923 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC116353.3-201ENST00000511215 249 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC109445.1-201ENST00000512356 383 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AP001207.1-201ENST00000524051 481 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 MTND2P26-201ENST00000528255 1029 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 ASB8-202ENST00000535055 657 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC005832.3-201ENST00000537929 631 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 ERP27-202ENST00000540097 993 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC002400.1-201ENST00000569310 726 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 SUGT1P3-202ENST00000604259 383 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC080013.3-201ENST00000606839 578 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AL451074.6-201ENST00000608512 729 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 MIR4278-201ENST00000636094 69 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 SAMMSON-227ENST00000642114 1199 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 TPTE2-202ENST00000382978 1677 ntTSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AP005435.3-201ENST00000531260 3198 ntBASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
CCDC144BQ3MJ40 AC005539.1-201ENST00000443768 1479 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 RNU6-1066P-201ENST00000363573 105 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 RNU6-157P-201ENST00000383957 107 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 SNORD116-8-201ENST00000384365 95 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 RNU6-1300P-201ENST00000391046 108 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 MRM2-202ENST00000407040 582 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC002524.1-201ENST00000411687 547 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 MTND2P18-201ENST00000419962 1030 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC099336.2-201ENST00000422457 254 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 MTND1P32-201ENST00000433043 938 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 OR7E116P-201ENST00000448529 957 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AL450023.1-201ENST00000450868 751 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 RPL21P134-201ENST00000453468 483 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC099560.2-201ENST00000457554 255 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 RN7SL583P-201ENST00000475692 287 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 RN7SL809P-201ENST00000482040 297 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC093270.2-201ENST00000486157 792 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC008953.1-201ENST00000497334 318 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC024558.1-201ENST00000505008 528 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC008837.2-201ENST00000513076 418 ntBASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.47□□□□□ -1.37
CCDC144BQ3MJ40 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 105.1 ms