Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
EPHB3P54753 AC012078.1-201ENST00000405035 1646 ntBASIC6.07□□□□□ -1.44
EPHB3P54753 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 SRRM1P3-201ENST00000426911 2678 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 IMMTP1-201ENST00000435590 2219 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC132825.1-201ENST00000463573 2247 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC117409.1-201ENST00000470499 1310 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
EPHB3P54753 RNU6-560P-201ENST00000364007 108 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 OR6C69P-201ENST00000394268 893 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AL360271.1-201ENST00000395679 510 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AL391422.1-201ENST00000402155 436 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 ARL4AP5-201ENST00000404372 599 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 TPMTP3-201ENST00000411928 735 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 ETF1P3-201ENST00000430422 1160 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 FMO7P-201ENST00000436045 768 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC093155.1-201ENST00000440164 826 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 TRIM60P18-201ENST00000441518 828 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC015983.1-201ENST00000441577 373 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC004865.1-201ENST00000442276 1003 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 RPL21P134-201ENST00000453468 483 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 UBDP1-202ENST00000457888 382 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 SIAH1P1-201ENST00000479411 923 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC108693.1-201ENST00000496068 432 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC084024.2-201ENST00000503480 791 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC073358.1-201ENST00000505671 684 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 ARL2BPP4-201ENST00000506854 471 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC074255.1-201ENST00000511259 501 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 BX510359.5-201ENST00000515651 304 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 RBM22P12-201ENST00000567098 1255 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC127024.5-201ENST00000580085 462 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC063977.5-201ENST00000601044 974 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC006566.1-201ENST00000608943 513 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC005899.7-201ENST00000618199 588 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 GTF2IP4-201ENST00000453092 2054 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 AC114786.1-201ENST00000512892 1415 ntBASIC6.06□□□□□ -1.44
EPHB3P54753 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
EPHB3P54753 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.06□□□□□ -1.44
EPHB3P54753 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.06□□□□□ -1.44
EPHB3P54753 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
EPHB3P54753 AL034546.1-201ENST00000623740 3693 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 MRE11P1-201ENST00000464884 2127 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC6.05□□□□□ -1.44
EPHB3P54753 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
EPHB3P54753 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
EPHB3P54753 LINC02019-201ENST00000608605 2060 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.05□□□□□ -1.44
EPHB3P54753 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
EPHB3P54753 AP004607.3-201ENST00000530354 3915 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.05□□□□□ -1.44
EPHB3P54753 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.05□□□□□ -1.44
EPHB3P54753 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
EPHB3P54753 AC007842.1-201ENST00000597336 2039 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
EPHB3P54753 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
EPHB3P54753 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
EPHB3P54753 SNORA72.1-201ENST00000363485 129 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 RNU4-91P-201ENST00000364778 135 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 SNORA70H-201ENST00000383910 135 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 SNORA70J-201ENST00000384182 135 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 AL035419.1-201ENST00000397037 564 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 SNX10-203ENST00000409367 746 ntTSL 5 BASIC6.05□□□□□ -1.44
EPHB3P54753 CEACAMP8-201ENST00000413902 580 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC6.05□□□□□ -1.44
EPHB3P54753 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.05□□□□□ -1.44
EPHB3P54753 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC6.05□□□□□ -1.44
EPHB3P54753 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.05□□□□□ -1.44
EPHB3P54753 CYCSP46-201ENST00000423569 204 ntBASIC6.05□□□□□ -1.44
EPHB3P54753 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms