Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 RNU6-666P-201ENST00000363499 107 ntBASIC5□□□□□ -1.61
LIMK1P53667 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 SNORA40.4-201ENST00000390971 128 ntBASIC5□□□□□ -1.61
LIMK1P53667 PPIAP9-201ENST00000403866 498 ntBASIC5□□□□□ -1.61
LIMK1P53667 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5□□□□□ -1.61
LIMK1P53667 BX510359.2-201ENST00000417920 305 ntBASIC5□□□□□ -1.61
LIMK1P53667 AL121882.1-201ENST00000422893 417 ntBASIC5□□□□□ -1.61
LIMK1P53667 CENPIP1-201ENST00000425713 902 ntBASIC5□□□□□ -1.61
LIMK1P53667 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5□□□□□ -1.61
LIMK1P53667 OR1H1P-201ENST00000448731 937 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC239809.1-201ENST00000450470 217 ntBASIC5□□□□□ -1.61
LIMK1P53667 MTND2P6-201ENST00000455337 1030 ntBASIC5□□□□□ -1.61
LIMK1P53667 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 CREM-238ENST00000488741 651 ntTSL 2 BASIC5□□□□□ -1.61
LIMK1P53667 AL049874.2-201ENST00000492636 288 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC010468.3-201ENST00000508225 458 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC008628.1-201ENST00000508663 265 ntBASIC5□□□□□ -1.61
LIMK1P53667 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 AC108120.2-201ENST00000512973 294 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC103833.1-201ENST00000517442 172 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC5□□□□□ -1.61
LIMK1P53667 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 OR8A2P-201ENST00000528631 952 ntBASIC5□□□□□ -1.61
LIMK1P53667 OSBPL9P3-201ENST00000534523 595 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC093014.1-201ENST00000548926 724 ntBASIC5□□□□□ -1.61
LIMK1P53667 AL136520.1-202ENST00000555494 763 ntBASIC5□□□□□ -1.61
LIMK1P53667 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5□□□□□ -1.61
LIMK1P53667 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 MIR4716-201ENST00000579628 84 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 AC135178.6-201ENST00000605314 398 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC010857.1-201ENST00000606398 594 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC5□□□□□ -1.61
LIMK1P53667 MLECP1-201ENST00000615893 709 ntBASIC5□□□□□ -1.61
LIMK1P53667 AL645927.2-201ENST00000618350 349 ntBASIC5□□□□□ -1.61
LIMK1P53667 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5□□□□□ -1.61
LIMK1P53667 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
LIMK1P53667 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5□□□□□ -1.61
LIMK1P53667 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK1P53667 AL359715.4-201ENST00000606629 1436 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 USP50-205ENST00000616326 1419 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC120338.1-201ENST00000625074 1541 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK1P53667 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 MIR23B-201ENST00000384832 97 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 RNU6-244P-201ENST00000391028 104 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 ATP5HP3-201ENST00000396994 486 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AL353692.2-201ENST00000407054 335 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 RNA5SP498-201ENST00000411342 120 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 ELOCP19-201ENST00000411919 318 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK1P53667 SEC63P1-201ENST00000425785 1258 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AL161722.2-201ENST00000434731 981 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC073143.1-201ENST00000436316 395 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK1P53667 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AL354714.3-201ENST00000447284 493 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 RPL5P30-201ENST00000465511 891 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.99□□□□□ -1.61
LIMK1P53667 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC083829.1-201ENST00000503756 657 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 MYL12BP2-201ENST00000503948 512 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 HMGB1P23-201ENST00000518743 568 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
LIMK1P53667 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC022884.3-201ENST00000579571 248 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.99□□□□□ -1.61
LIMK1P53667 AC093227.2-201ENST00000589357 285 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
LIMK1P53667 AP000769.2-201ENST00000602344 396 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC105254.2-201ENST00000603636 436 ntBASIC4.99□□□□□ -1.61
LIMK1P53667 AC108738.1-201ENST00000603703 237 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 108.6 ms