Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.72□□□□□ -1.65
PDX1P52945 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 AP005432.1-201ENST00000580891 3485 ntBASIC4.72□□□□□ -1.65
PDX1P52945 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 FAM3C2-201ENST00000312214 681 ntBASIC4.72□□□□□ -1.65
PDX1P52945 RNU6-1005P-201ENST00000384519 107 ntBASIC4.72□□□□□ -1.65
PDX1P52945 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDX1P52945 MIR298-201ENST00000401212 88 ntBASIC4.72□□□□□ -1.65
PDX1P52945 RPL5P19-201ENST00000404228 893 ntBASIC4.72□□□□□ -1.65
PDX1P52945 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 AL606495.1-201ENST00000422100 813 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AL160175.1-201ENST00000428124 247 ntBASIC4.72□□□□□ -1.65
PDX1P52945 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 TXNP5-201ENST00000441043 315 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC4.72□□□□□ -1.65
PDX1P52945 RPL32P14-201ENST00000463196 378 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AC107015.1-201ENST00000466902 747 ntBASIC4.72□□□□□ -1.65
PDX1P52945 SSR3-206ENST00000476217 807 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 SYT14P1-201ENST00000481459 721 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC4.72□□□□□ -1.65
PDX1P52945 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.72□□□□□ -1.65
PDX1P52945 RNU6-513P-201ENST00000516104 104 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC4.72□□□□□ -1.65
PDX1P52945 ASB8-204ENST00000536071 568 ntTSL 4 BASIC4.72□□□□□ -1.65
PDX1P52945 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC4.72□□□□□ -1.65
PDX1P52945 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.72□□□□□ -1.65
PDX1P52945 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 MTATP6P2-201ENST00000603319 678 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AL139022.2-201ENST00000606934 443 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AP001033.2-201ENST00000609701 1003 ntBASIC4.72□□□□□ -1.65
PDX1P52945 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.72□□□□□ -1.65
PDX1P52945 AP000648.2-201ENST00000624182 404 ntBASIC4.72□□□□□ -1.65
PDX1P52945 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 AC100778.3-201ENST00000580060 1750 ntBASIC4.72□□□□□ -1.65
PDX1P52945 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDX1P52945 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
PDX1P52945 MTCO1P4-201ENST00000520516 1409 ntBASIC4.72□□□□□ -1.65
PDX1P52945 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDX1P52945 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PDX1P52945 THAP12P5-201ENST00000405864 2275 ntBASIC4.71□□□□□ -1.65
PDX1P52945 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDX1P52945 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
PDX1P52945 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PDX1P52945 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.71□□□□□ -1.66
PDX1P52945 ECM1P2-201ENST00000503354 1577 ntBASIC4.71□□□□□ -1.66
PDX1P52945 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.71□□□□□ -1.66
PDX1P52945 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDX1P52945 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDX1P52945 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDX1P52945 MIR16-2-201ENST00000362117 81 ntBASIC4.71□□□□□ -1.66
PDX1P52945 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDX1P52945 U3.30-201ENST00000391308 210 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC4.71□□□□□ -1.66
PDX1P52945 AC104333.2-201ENST00000422630 192 ntBASIC4.71□□□□□ -1.66
PDX1P52945 RPS27AP7-201ENST00000422792 455 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC009480.2-201ENST00000422916 432 ntBASIC4.71□□□□□ -1.66
PDX1P52945 CNOT7P1-201ENST00000429006 852 ntBASIC4.71□□□□□ -1.66
PDX1P52945 VDAC1P6-201ENST00000430062 855 ntBASIC4.71□□□□□ -1.66
PDX1P52945 MRPL50P1-201ENST00000431951 384 ntBASIC4.71□□□□□ -1.66
PDX1P52945 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.71□□□□□ -1.66
PDX1P52945 RNF2P1-201ENST00000442955 1010 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.71□□□□□ -1.66
PDX1P52945 AC023512.1-201ENST00000444513 499 ntBASIC4.71□□□□□ -1.66
PDX1P52945 GXYLT1P1-201ENST00000446657 490 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.71□□□□□ -1.66
PDX1P52945 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDX1P52945 CEACAMP6-201ENST00000452007 574 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC234781.3-201ENST00000452540 973 ntBASIC4.71□□□□□ -1.66
PDX1P52945 HMGB1P4-201ENST00000455362 567 ntBASIC4.71□□□□□ -1.66
PDX1P52945 snoU13.1-201ENST00000459157 104 ntBASIC4.71□□□□□ -1.66
PDX1P52945 SCARNA22-201ENST00000503991 125 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC025459.1-201ENST00000504072 156 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.71□□□□□ -1.66
PDX1P52945 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.71□□□□□ -1.66
PDX1P52945 NDUFB4P11-201ENST00000560510 395 ntBASIC4.71□□□□□ -1.66
PDX1P52945 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.71□□□□□ -1.66
PDX1P52945 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.71□□□□□ -1.66
PDX1P52945 MIR4284-201ENST00000578924 81 ntBASIC4.71□□□□□ -1.66
PDX1P52945 BNIP3P27-201ENST00000599991 412 ntBASIC4.71□□□□□ -1.66
PDX1P52945 AC026741.1-201ENST00000605892 482 ntBASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 131.2 ms