Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.33□□□□□ -1.72
GTF2A1P52655 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
GTF2A1P52655 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
GTF2A1P52655 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.33□□□□□ -1.72
GTF2A1P52655 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC4.33□□□□□ -1.72
GTF2A1P52655 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC011493.1-201ENST00000596753 1632 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 RIOK3P1-201ENST00000418778 1528 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
GTF2A1P52655 RNU1-18P-201ENST00000363062 164 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC009804.1-201ENST00000400949 179 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 VN1R12P-201ENST00000403778 876 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 MTCO3P31-201ENST00000405526 789 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AC108075.1-201ENST00000424692 529 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.32□□□□□ -1.72
GTF2A1P52655 IFNNP1-201ENST00000429219 553 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AL451139.1-201ENST00000434718 346 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 TXNP1-201ENST00000441872 371 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC4.32□□□□□ -1.72
GTF2A1P52655 LINC01698-201ENST00000443636 727 ntTSL 3 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC004801.2-202ENST00000463559 283 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 RN7SL481P-201ENST00000477764 299 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 RN7SL184P-201ENST00000488308 297 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 RN7SL466P-201ENST00000497546 295 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 TRAV31-201ENST00000502780 342 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 BTF3L4P4-201ENST00000506381 449 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC105254.2-201ENST00000603636 436 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AC010201.1-201ENST00000605051 540 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AP002360.3-201ENST00000607673 710 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AP003392.5-201ENST00000607857 415 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 AL158062.1-201ENST00000619632 745 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.32□□□□□ -1.72
GTF2A1P52655 AC000123.2-201ENST00000623124 461 ntBASIC4.32□□□□□ -1.72
GTF2A1P52655 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.32□□□□□ -1.72
GTF2A1P52655 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
GTF2A1P52655 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4.32□□□□□ -1.72
GTF2A1P52655 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.32□□□□□ -1.72
GTF2A1P52655 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC4.31□□□□□ -1.72
GTF2A1P52655 TMSB4XP4-201ENST00000323496 618 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
GTF2A1P52655 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 AC068295.1-201ENST00000413056 153 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF2A1P52655 RPL35AP24-201ENST00000413846 330 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF2A1P52655 RAD23BP1-201ENST00000421404 1227 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AL049610.1-201ENST00000423374 372 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 RPL7L1P9-201ENST00000431298 745 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 USP9YP31-201ENST00000431405 881 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AC083863.1-201ENST00000438811 231 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AL133260.2-201ENST00000445833 396 ntTSL 3 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AL133244.1-201ENST00000456007 258 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AC094085.1-201ENST00000468914 584 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC4.31□□□□□ -1.72
GTF2A1P52655 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AC084757.1-201ENST00000559987 490 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 EIF1P5-201ENST00000585002 234 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AC083899.3-201ENST00000603413 594 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 AL049634.3-201ENST00000604968 457 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 METTL15-211ENST00000634762 718 ntTSL 5 BASIC4.31□□□□□ -1.72
GTF2A1P52655 AC132825.8-201ENST00000640783 297 ntBASIC4.31□□□□□ -1.72
GTF2A1P52655 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.31□□□□□ -1.72
GTF2A1P52655 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
GTF2A1P52655 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.3□□□□□ -1.72
GTF2A1P52655 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC4.3□□□□□ -1.72
GTF2A1P52655 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 PLSCR2-201ENST00000336685 1272 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
GTF2A1P52655 PTMAP5-201ENST00000393073 333 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms