Protein–RNA interactions for Protein: P49639

HOXA1, Homeobox protein Hox-A1, humanhuman

Predicted RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1P49639 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXA1P49639 RNU6-543P-201ENST00000362576 108 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 RNU6-984P-201ENST00000363236 109 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 CDC123-202ENST00000378900 933 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA1P49639 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
HOXA1P49639 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 MTND4P13-201ENST00000402078 1023 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AL136131.1-201ENST00000406079 803 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.35□□□□□ -1.71
HOXA1P49639 EIF4A1P3-201ENST00000411521 244 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 VTA1P1-201ENST00000414044 866 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 MTND4P3-201ENST00000417829 541 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 EIF4EP1-201ENST00000422311 642 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 AC127526.2-201ENST00000426436 775 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 PTGES3P1-201ENST00000439531 483 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 CR769776.1-201ENST00000441254 787 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 GEMIN8P3-201ENST00000445417 720 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 RPL34P26-201ENST00000445636 354 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 MTATP6P26-201ENST00000445926 662 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 AL035407.2-201ENST00000454090 378 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC104339.1-201ENST00000465478 348 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 RPS23P6-201ENST00000466136 431 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC107015.1-201ENST00000466902 747 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 AC090686.1-201ENST00000481577 749 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 DEFB109F-201ENST00000491870 277 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 RPS24P16-201ENST00000497294 392 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 B4GALNT2P1-201ENST00000508857 307 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 MTND6P2-201ENST00000512226 524 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 MRPS16P1-201ENST00000523462 412 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC104417.1-201ENST00000523974 751 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 LRRC6P1-201ENST00000532188 885 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 OR8G3P-201ENST00000533406 921 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXA1P49639 AC025260.1-201ENST00000548858 430 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.35□□□□□ -1.71
HOXA1P49639 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 IGBP1P1-201ENST00000554337 1009 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA1P49639 MIR4675-201ENST00000577898 77 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA1P49639 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.35□□□□□ -1.71
HOXA1P49639 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.35□□□□□ -1.71
HOXA1P49639 AC090525.3-201ENST00000605601 189 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AC244107.2-201ENST00000611773 76 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
HOXA1P49639 AC109583.2-201ENST00000617367 129 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 FRG1HP-204ENST00000617940 757 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 AL121594.5-201ENST00000631724 573 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 MTND2P41-201ENST00000637599 773 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 LINC01808-202ENST00000641680 1116 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.35□□□□□ -1.71
HOXA1P49639 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HOXA1P49639 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
HOXA1P49639 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
HOXA1P49639 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA1P49639 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA1P49639 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA1P49639 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA1P49639 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA1P49639 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
HOXA1P49639 MIR448-201ENST00000362131 111 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 RNU1-150P-201ENST00000362491 162 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 RN7SKP171-201ENST00000364417 303 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 RNA5SP433-201ENST00000364491 114 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 RN7SKP153-201ENST00000365026 316 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA1P49639 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA1P49639 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
HOXA1P49639 OR7E101P-201ENST00000400428 513 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 AL021331.1-201ENST00000402817 582 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 RN7SKP222-201ENST00000410651 315 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.34□□□□□ -1.71
HOXA1P49639 AC245060.4-201ENST00000413293 1121 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA1P49639 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA1P49639 MOB1AP1-201ENST00000430903 535 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 YWHAEP5-201ENST00000431545 765 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA1P49639 ARL5AP2-201ENST00000444698 533 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.34□□□□□ -1.71
HOXA1P49639 AC068135.1-201ENST00000446164 246 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.34□□□□□ -1.71
HOXA1P49639 Z73417.1-201ENST00000447373 778 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 AC004022.1-201ENST00000447766 1066 ntBASIC4.34□□□□□ -1.71
HOXA1P49639 AL450023.1-201ENST00000450868 751 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms