Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.85□□□□□ -1.63
CENPAP49450 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC4.85□□□□□ -1.63
CENPAP49450 AC023824.3-201ENST00000569003 562 ntBASIC4.85□□□□□ -1.63
CENPAP49450 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC4.85□□□□□ -1.63
CENPAP49450 RN7SL356P-201ENST00000582228 248 ntBASIC4.85□□□□□ -1.63
CENPAP49450 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.85□□□□□ -1.63
CENPAP49450 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC4.85□□□□□ -1.63
CENPAP49450 ZNF92P3-201ENST00000596594 954 ntBASIC4.85□□□□□ -1.63
CENPAP49450 AC108738.1-201ENST00000603703 237 ntBASIC4.85□□□□□ -1.63
CENPAP49450 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC4.85□□□□□ -1.63
CENPAP49450 AC009027.1-201ENST00000604510 479 ntBASIC4.85□□□□□ -1.63
CENPAP49450 U6.107-201ENST00000637108 79 ntBASIC4.85□□□□□ -1.63
CENPAP49450 AC008691.1-209ENST00000642094 814 ntBASIC4.85□□□□□ -1.63
CENPAP49450 AL355578.1-201ENST00000607405 1328 ntBASIC4.85□□□□□ -1.63
CENPAP49450 TLK1P1-201ENST00000456760 2440 ntBASIC4.85□□□□□ -1.63
CENPAP49450 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CENPAP49450 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.85□□□□□ -1.63
CENPAP49450 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CENPAP49450 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 AC114546.3-201ENST00000623582 1734 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AL137100.1-201ENST00000556703 1620 ntBASIC4.84□□□□□ -1.63
CENPAP49450 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 CYP1D1P-201ENST00000416662 1433 ntBASIC4.84□□□□□ -1.63
CENPAP49450 MFSD8-220ENST00000641243 1422 ntBASIC4.84□□□□□ -1.63
CENPAP49450 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.84□□□□□ -1.63
CENPAP49450 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 MRPS36-201ENST00000256441 1286 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 OR9K1P-201ENST00000326513 941 ntBASIC4.84□□□□□ -1.63
CENPAP49450 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
CENPAP49450 RNU6-543P-201ENST00000362576 108 ntBASIC4.84□□□□□ -1.63
CENPAP49450 SNORD116-12-201ENST00000384468 92 ntBASIC4.84□□□□□ -1.63
CENPAP49450 LYPLA1P3-201ENST00000402650 695 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 RPL34P3-201ENST00000421454 338 ntBASIC4.84□□□□□ -1.63
CENPAP49450 XKRYP1-201ENST00000423438 492 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC124944.2-201ENST00000429866 1242 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 XKRYP2-201ENST00000432915 492 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 OR6D1P-201ENST00000436165 939 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 AL050341.1-201ENST00000447743 313 ntBASIC4.84□□□□□ -1.63
CENPAP49450 ZNF886P-201ENST00000450781 723 ntBASIC4.84□□□□□ -1.63
CENPAP49450 PTGES3P5-201ENST00000455109 434 ntBASIC4.84□□□□□ -1.63
CENPAP49450 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 RPL23AP37-201ENST00000479658 549 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC134050.1-201ENST00000495088 933 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 EIF3KP3-201ENST00000514461 639 ntBASIC4.84□□□□□ -1.63
CENPAP49450 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 AC100784.1-201ENST00000522790 310 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC083923.1-201ENST00000523708 376 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 MTND3P12-201ENST00000559068 328 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC090515.3-201ENST00000560431 315 ntBASIC4.84□□□□□ -1.63
CENPAP49450 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.84□□□□□ -1.63
CENPAP49450 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 MTCYBP13-201ENST00000578634 1093 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 AC024060.1-201ENST00000607052 494 ntBASIC4.84□□□□□ -1.63
CENPAP49450 AP003400.3-201ENST00000624904 346 ntBASIC4.84□□□□□ -1.63
CENPAP49450 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.84□□□□□ -1.63
CENPAP49450 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC4.84□□□□□ -1.63
CENPAP49450 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
CENPAP49450 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CENPAP49450 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
CENPAP49450 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.64
CENPAP49450 AC093311.1-201ENST00000506586 2021 ntBASIC4.84□□□□□ -1.64
CENPAP49450 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
CENPAP49450 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC4.83□□□□□ -1.64
CENPAP49450 CR788268.1-201ENST00000603931 1809 ntBASIC4.83□□□□□ -1.64
CENPAP49450 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.83□□□□□ -1.64
CENPAP49450 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CENPAP49450 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC4.83□□□□□ -1.64
CENPAP49450 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
CENPAP49450 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
CENPAP49450 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CENPAP49450 CIR1P2-201ENST00000514821 1342 ntBASIC4.83□□□□□ -1.64
CENPAP49450 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CENPAP49450 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms