Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RPL12P28-201ENST00000430852 489 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 NRBF2P3-201ENST00000432731 865 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC007563.3-201ENST00000433233 371 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 MAPRE1P3-201ENST00000435438 796 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CR1P49238 HMGB3P9-201ENST00000441799 583 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CR1P49238 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CR1P49238 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AC063943.1-201ENST00000465434 453 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC108022.1-201ENST00000493466 478 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CR1P49238 MYL12AP1-201ENST00000518490 515 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CR1P49238 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 RN7SL652P-201ENST00000577769 300 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC209154.1-201ENST00000582156 337 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 SDR42E1P1-201ENST00000611327 477 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC4.06□□□□□ -1.76
CX3CR1P49238 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
CX3CR1P49238 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 A2MP1-204ENST00000566278 4130 ntBASIC4.06□□□□□ -1.76
CX3CR1P49238 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.06□□□□□ -1.76
CX3CR1P49238 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
CX3CR1P49238 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC015813.6-201ENST00000624409 5808 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.05□□□□□ -1.76
CX3CR1P49238 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 SNORA51.8-201ENST00000384234 132 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 Z98745.1-201ENST00000402553 494 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 LAP3P1-201ENST00000403648 294 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 OR51B3P-201ENST00000412287 913 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC093159.1-201ENST00000416845 424 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC097523.2-201ENST00000435551 652 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AL627308.1-201ENST00000435693 821 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC005229.2-201ENST00000456995 399 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 RPL7P16-201ENST00000479738 738 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 OR5M14P-201ENST00000506803 618 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CR1P49238 RNU2-30P-201ENST00000516209 141 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CR1P49238 HIGD1AP18-201ENST00000520730 278 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 OR4V1P-201ENST00000525394 1140 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.05□□□□□ -1.76
CX3CR1P49238 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.05□□□□□ -1.76
CX3CR1P49238 HMGB3P26-201ENST00000560051 582 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC009268.1-201ENST00000561352 1203 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC009117.1-201ENST00000563948 554 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 MIR3667-201ENST00000581025 74 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC091178.1-203ENST00000584586 279 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC008966.2-201ENST00000606157 453 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 SNX18P1Y-201ENST00000616231 511 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC016769.4-201ENST00000616893 535 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC016957.2-201ENST00000616998 848 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 uc_338.9-201ENST00000617424 182 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.05□□□□□ -1.76
CX3CR1P49238 AC087385.3-201ENST00000620477 187 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AC068870.2-201ENST00000620635 389 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CX3CR1P49238 HSPD1P14-201ENST00000432666 1618 ntBASIC4.05□□□□□ -1.76
CX3CR1P49238 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.05□□□□□ -1.76
CX3CR1P49238 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CX3CR1P49238 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
CX3CR1P49238 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms