Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-1P43699 PPIAP21-201ENST00000464473 501 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 OR2A1-AS1-202ENST00000467944 422 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 RPL7P6-201ENST00000480903 738 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC119751.1-201ENST00000513357 765 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 RPL23AP53-201ENST00000521854 457 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 MORF4L1P3-201ENST00000525966 950 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.21□□□□□ -1.74
NKX2-1P43699 OR8I1P-201ENST00000529291 931 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 AC107918.3-201ENST00000533272 382 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 YWHABP2-201ENST00000540201 713 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-1P43699 CT45A3-201ENST00000597510 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 AL499605.1-201ENST00000604628 403 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 CT45A2-201ENST00000605791 1076 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 AL035461.2-201ENST00000619201 524 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AP000770.2-201ENST00000623694 100 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 AL078595.3-201ENST00000623815 1166 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 ATE1-AS1-202ENST00000636460 506 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 AC006927.4-201ENST00000639187 543 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 MIR193BHG-214ENST00000641765 509 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-1P43699 ASNSP1-204ENST00000641977 1664 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
NKX2-1P43699 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 OR55B1P-203ENST00000641518 2602 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC4.21□□□□□ -1.74
NKX2-1P43699 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC090971.4-201ENST00000560291 1800 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC4.21□□□□□ -1.74
NKX2-1P43699 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
NKX2-1P43699 AC104446.1-201ENST00000613728 1321 ntBASIC4.21□□□□□ -1.74
NKX2-1P43699 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AL450326.2-201ENST00000421913 1962 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC091305.2-201ENST00000624049 1576 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC093535.2-201ENST00000624769 2326 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 CASC19-221ENST00000641309 1382 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NKX2-1P43699 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NKX2-1P43699 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NKX2-1P43699 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NKX2-1P43699 RNA5SP394-201ENST00000364216 119 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
NKX2-1P43699 SNORA68.2-201ENST00000391263 128 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 HMGB3P5-201ENST00000428894 612 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 MTND2P5-201ENST00000432656 1006 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 CYP3A5-203ENST00000439761 1075 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX2-1P43699 DNAJA1P5-201ENST00000440278 943 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC092809.1-201ENST00000441469 474 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 MTCO1P53-201ENST00000441633 699 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC004980.3-201ENST00000447046 365 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC105399.1-202ENST00000447303 205 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 RANP1-206ENST00000455094 651 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 RPL6P9-201ENST00000466502 859 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 RPS3AP6-201ENST00000484430 795 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC005412.2-201ENST00000492004 341 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC4.2□□□□□ -1.74
NKX2-1P43699 HPRT1P1-201ENST00000509498 657 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 AC006499.4-201ENST00000510947 694 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC4.2□□□□□ -1.74
NKX2-1P43699 OR8G5-201ENST00000524943 1041 ntBASIC4.2□□□□□ -1.74
NKX2-1P43699 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC4.2□□□□□ -1.74
NKX2-1P43699 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms