Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX3P41225 EIF4HP2-201ENST00000424380 563 ntBASIC4.47□□□□□ -1.69
SOX3P41225 OR2B7P-201ENST00000429302 934 ntBASIC4.47□□□□□ -1.69
SOX3P41225 BX119904.1-201ENST00000432026 348 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX3P41225 MOB1AP2-201ENST00000446060 614 ntBASIC4.47□□□□□ -1.69
SOX3P41225 RPL23AP23-201ENST00000452590 471 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX3P41225 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 CDH12P4-201ENST00000517835 295 ntBASIC4.47□□□□□ -1.69
SOX3P41225 CDH12P3-201ENST00000517935 295 ntBASIC4.47□□□□□ -1.69
SOX3P41225 CDH12P1-201ENST00000518435 295 ntBASIC4.47□□□□□ -1.69
SOX3P41225 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.47□□□□□ -1.69
SOX3P41225 AC109635.6-201ENST00000525487 1113 ntBASIC4.47□□□□□ -1.69
SOX3P41225 UBTFL9-201ENST00000534504 1148 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC4.47□□□□□ -1.69
SOX3P41225 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 MIR4270-201ENST00000581799 70 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AC087283.1-201ENST00000604029 1074 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AL391358.1-201ENST00000605342 190 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AL451049.1-201ENST00000608672 497 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AC097505.1-201ENST00000610199 565 ntBASIC4.47□□□□□ -1.69
SOX3P41225 AC007497.1-201ENST00000610421 561 ntBASIC4.47□□□□□ -1.69
SOX3P41225 NAA60-237ENST00000615865 326 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 AP000943.4-201ENST00000622912 357 ntBASIC4.47□□□□□ -1.69
SOX3P41225 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX3P41225 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
SOX3P41225 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.47□□□□□ -1.69
SOX3P41225 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
SOX3P41225 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
SOX3P41225 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SOX3P41225 AC009643.2-201ENST00000603543 1448 ntBASIC4.46□□□□□ -1.69
SOX3P41225 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.69
SOX3P41225 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
SOX3P41225 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.46□□□□□ -1.69
SOX3P41225 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
SOX3P41225 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 NCLP2-201ENST00000416078 1462 ntBASIC4.46□□□□□ -1.7
SOX3P41225 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 GCNT6-201ENST00000379591 934 ntBASIC4.46□□□□□ -1.7
SOX3P41225 U3.30-201ENST00000391308 210 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AL035405.1-201ENST00000400795 710 ntBASIC4.46□□□□□ -1.7
SOX3P41225 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 RN7SKP100-201ENST00000411258 284 ntBASIC4.46□□□□□ -1.7
SOX3P41225 RNU2-22P-201ENST00000411266 212 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX3P41225 AL590806.1-201ENST00000415818 853 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 AC013410.2-201ENST00000422627 201 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 FABP7P1-201ENST00000424004 391 ntBASIC4.46□□□□□ -1.7
SOX3P41225 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.46□□□□□ -1.7
SOX3P41225 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 AL512637.2-201ENST00000431287 1256 ntBASIC4.46□□□□□ -1.7
SOX3P41225 NDUFA5P10-201ENST00000432147 357 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC092162.1-201ENST00000432828 434 ntBASIC4.46□□□□□ -1.7
SOX3P41225 NMNAT1P2-201ENST00000435192 860 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 RNFT1P2-201ENST00000443064 757 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.46□□□□□ -1.7
SOX3P41225 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.46□□□□□ -1.7
SOX3P41225 SYT14P1-201ENST00000481459 721 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC108120.2-201ENST00000512973 294 ntBASIC4.46□□□□□ -1.7
SOX3P41225 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 IGHV3-63-201ENST00000518422 341 ntBASIC4.46□□□□□ -1.7
SOX3P41225 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 SETP1-201ENST00000556014 845 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.46□□□□□ -1.7
SOX3P41225 SNORA74C-1-201ENST00000580726 201 ntBASIC4.46□□□□□ -1.7
SOX3P41225 CBX3P2-202ENST00000583365 535 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.46□□□□□ -1.7
SOX3P41225 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 BNIP3P27-201ENST00000599991 412 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC084373.1-201ENST00000603311 235 ntBASIC4.46□□□□□ -1.7
SOX3P41225 MTATP6P2-201ENST00000603319 678 ntBASIC4.46□□□□□ -1.7
SOX3P41225 AC073137.1-201ENST00000605636 634 ntBASIC4.46□□□□□ -1.7
SOX3P41225 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 FAM27B-201ENST00000610601 213 ntBASIC4.46□□□□□ -1.7
SOX3P41225 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.46□□□□□ -1.7
SOX3P41225 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
SOX3P41225 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
SOX3P41225 AC007382.1-201ENST00000624376 2618 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms