Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 FTH1P16-201ENST00000435241 552 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AL353754.1-201ENST00000440219 340 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC092809.1-201ENST00000441469 474 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC107399.1-201ENST00000451226 265 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 DNAJC19P8-201ENST00000452887 259 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC011005.4-201ENST00000466717 535 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 RPL23P10-201ENST00000468780 412 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 RN7SL390P-201ENST00000470634 284 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC233702.1-201ENST00000482905 502 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 RPL22P13-201ENST00000493291 347 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 CBX1-205ENST00000495350 550 ntTSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC008967.1-201ENST00000504843 163 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 HSD3BP3-201ENST00000514706 994 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AP003181.2-201ENST00000528941 181 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC016152.1-201ENST00000548344 521 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 OR4T1P-201ENST00000554933 911 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 AP001180.3-201ENST00000582221 145 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC068020.1-201ENST00000594215 661 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.2□□□□□ -1.42
COL8A1P27658 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC130352.1-201ENST00000602979 661 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 RPL23AP61-201ENST00000623642 466 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC091903.1-201ENST00000624322 454 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 MS4A7-202ENST00000358246 2871 ntTSL 3 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC010886.1-201ENST00000437380 2869 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 AC109361.1-201ENST00000513220 3526 ntTSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 FHL1-204ENST00000370683 2565 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 MTCO1P25-201ENST00000414449 1799 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 CTAGE3P-201ENST00000454280 2404 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 MAPK10-281ENST00000641170 3070 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 SETDB1-205ENST00000368969 4370 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 PIK3R3-202ENST00000372006 5019 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 AP002370.1-201ENST00000528055 1602 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 USP44-208ENST00000552440 1818 ntTSL 5 BASIC6.2□□□□□ -1.42
COL8A1P27658 AC073342.2-201ENST00000595842 1800 ntBASIC6.2□□□□□ -1.42
COL8A1P27658 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 BRCA1-210ENST00000471181 5936 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
COL8A1P27658 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
COL8A1P27658 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.19□□□□□ -1.42
COL8A1P27658 AC008555.1-201ENST00000561778 2757 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.19□□□□□ -1.42
COL8A1P27658 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 SEM1-215ENST00000615352 2637 ntTSL 5 BASIC6.19□□□□□ -1.42
COL8A1P27658 ACTA2-AS1-201ENST00000437930 2450 ntTSL 2 BASIC6.19□□□□□ -1.42
COL8A1P27658 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 AC090771.1-201ENST00000585803 1618 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 HDAC9-201ENST00000401921 3254 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 SUGT1P1-201ENST00000379514 476 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 RNU6-746P-201ENST00000384112 109 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 RPL23AP32-201ENST00000395315 459 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AL355375.1-201ENST00000405686 392 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 PRELID1P2-201ENST00000407805 396 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC6.19□□□□□ -1.42
COL8A1P27658 OR51A3P-201ENST00000413596 924 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC6.19□□□□□ -1.42
COL8A1P27658 RPL31P12-201ENST00000422587 358 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AL606753.1-201ENST00000427435 87 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.19□□□□□ -1.42
COL8A1P27658 AL391987.1-201ENST00000441025 200 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 GAPDHP37-201ENST00000442317 968 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AL035420.1-202ENST00000450129 357 ntTSL 3 BASIC6.19□□□□□ -1.42
COL8A1P27658 TVP23CP1-201ENST00000450317 639 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC6.19□□□□□ -1.42
COL8A1P27658 AC008571.1-201ENST00000467232 300 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC6.19□□□□□ -1.42
COL8A1P27658 RNU6-408P-201ENST00000515910 100 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 RNA5SP441-201ENST00000516809 88 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 RNU6-1003P-201ENST00000517099 105 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC6.19□□□□□ -1.42
COL8A1P27658 MRPS16P1-201ENST00000523462 412 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 OR5D2P-201ENST00000524390 911 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
COL8A1P27658 AP002373.2-201ENST00000541631 1060 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC6.19□□□□□ -1.42
COL8A1P27658 TRAV15-201ENST00000556680 249 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 PPIAP6-201ENST00000557078 499 ntBASIC6.19□□□□□ -1.42
COL8A1P27658 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms