Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 AC007016.1-201ENST00000512110 244 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 MTCO1P35-201ENST00000515270 228 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 AP005119.2-201ENST00000579735 1105 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.7□□□□□ -1.5
POLR2AP24928 AC009318.3-201ENST00000616916 503 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 AC007671.2-201ENST00000637344 619 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2AP24928 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 CR382285.2-201ENST00000624662 1495 ntBASIC5.7□□□□□ -1.5
POLR2AP24928 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.7□□□□□ -1.5
POLR2AP24928 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
POLR2AP24928 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC5.7□□□□□ -1.5
POLR2AP24928 AKAP6-212ENST00000557272 4601 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 U3.32-201ENST00000408116 212 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 UQCRBP1-201ENST00000421129 336 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 MTCO1P53-201ENST00000441633 699 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 RPS17P11-201ENST00000474297 293 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC104763.1-201ENST00000475274 360 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC020593.1-201ENST00000507399 299 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 RNU5A-4P-201ENST00000516588 111 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC091163.3-201ENST00000518269 1144 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC093014.1-201ENST00000548926 724 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC021851.1-201ENST00000608537 1082 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 HULC.1-201ENST00000612720 240 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC005618.4-201ENST00000625053 554 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 RAD17P1-201ENST00000418130 2042 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC099786.3-201ENST00000565735 1410 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 ATP5HP3-201ENST00000396994 486 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 Y_RNA.619-201ENST00000410951 90 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC009238.2-201ENST00000431026 355 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 NIFKP7-201ENST00000503365 834 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 MTCO3P7-201ENST00000510008 774 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC5.69□□□□□ -1.5
POLR2AP24928 SNORA76.2-201ENST00000517095 137 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 AP001804.1-201ENST00000526868 919 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC105233.3-201ENST00000531125 744 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC135628.1-201ENST00000568867 534 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 MIR92B-201ENST00000607575 96 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 AC010632.3-201ENST00000611377 369 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
POLR2AP24928 METTL8-218ENST00000638989 876 ntTSL 5 BASIC5.69□□□□□ -1.5
POLR2AP24928 METTL8-219ENST00000640734 726 ntTSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
POLR2AP24928 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
POLR2AP24928 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
POLR2AP24928 AC097063.1-201ENST00000426714 1797 ntBASIC5.69□□□□□ -1.5
POLR2AP24928 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC5.68□□□□□ -1.5
POLR2AP24928 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
POLR2AP24928 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
POLR2AP24928 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
POLR2AP24928 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC5.68□□□□□ -1.5
POLR2AP24928 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.68□□□□□ -1.5
POLR2AP24928 MTND1P1-201ENST00000445453 368 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 MTCO2P7-201ENST00000446518 666 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.68□□□□□ -1.5
POLR2AP24928 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.68□□□□□ -1.5
POLR2AP24928 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC5.68□□□□□ -1.5
POLR2AP24928 RPL21P126-201ENST00000470049 478 ntBASIC5.68□□□□□ -1.5
POLR2AP24928 RPS3AP43-201ENST00000479743 781 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms