Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 AC024560.2-201ENST00000507981 1497 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 NACA-203ENST00000454682 6629 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC132219.2-201ENST00000624416 2327 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
PDGFAP04085 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 RNU6-282P-201ENST00000365357 103 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 RNU6-767P-201ENST00000384132 107 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 RPL7P25-201ENST00000404151 721 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MIR1302-11-201ENST00000408051 138 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MIR1302-9-201ENST00000408365 138 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MIR1302-10-201ENST00000408734 138 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MIR1282-201ENST00000408865 101 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 TPMTP2-201ENST00000414372 726 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AL353193.1-201ENST00000421444 268 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 OR51AB1P-201ENST00000429046 620 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 PPIAP13-201ENST00000434706 478 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC234771.2-201ENST00000445718 597 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AL136380.1-201ENST00000447970 162 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC118758.1-202ENST00000454719 225 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MTCO3P2-201ENST00000457365 171 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 RPS20P20-201ENST00000460498 340 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 RPL39P36-201ENST00000490784 156 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 RPSAP51-201ENST00000497462 645 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 ACTR3BP4-201ENST00000503033 1244 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 HMGN1P13-201ENST00000505795 138 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 AC010486.1-201ENST00000511793 424 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 SOD1P3-201ENST00000518682 454 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 RGS5-219ENST00000528019 512 ntTSL 4 BASIC6.42□□□□□ -1.38
PDGFAP04085 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC008127.2-201ENST00000549925 1075 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC122134.1-201ENST00000565664 1104 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC002519.2-203ENST00000567043 837 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC012368.3-201ENST00000604190 219 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC013553.2-201ENST00000604244 589 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AL136363.1-201ENST00000605349 337 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 ACTR3BP1-201ENST00000605584 1247 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MIR1302-2-201ENST00000607096 138 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AL161457.2-204ENST00000609241 869 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 MIR6778-201ENST00000617912 73 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AC009237.17-201ENST00000618111 748 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC010149.2-201ENST00000637608 315 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC6.42□□□□□ -1.38
PDGFAP04085 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC6.42□□□□□ -1.38
PDGFAP04085 AC007485.2-201ENST00000623493 1667 ntBASIC6.42□□□□□ -1.38
PDGFAP04085 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 CACNA1E-210ENST00000621791 16171 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
PDGFAP04085 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 LINC01013-201ENST00000422700 1831 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFAP04085 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 FER-202ENST00000438717 1531 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFAP04085 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFAP04085 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.41□□□□□ -1.38
PDGFAP04085 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFAP04085 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
PDGFAP04085 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFAP04085 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 AC011008.2-201ENST00000624866 3352 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 CXCL11-201ENST00000306621 1606 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.41□□□□□ -1.38
PDGFAP04085 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
PDGFAP04085 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
PDGFAP04085 SNORD35A-201ENST00000363389 86 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 SNORA68-201ENST00000384437 133 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 RNU6-692P-201ENST00000384496 107 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 RPL23AP32-201ENST00000395315 459 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 AL359715.1-201ENST00000404330 555 ntBASIC6.41□□□□□ -1.38
PDGFAP04085 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC6.41□□□□□ -1.38
PDGFAP04085 AF228730.4-201ENST00000421457 183 ntBASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms