Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 BNIP3P19-201ENST00000605397 577 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 AC039056.2-201ENST00000622261 511 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 FP325313.1-201ENST00000638228 703 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.13□□□□□ -1.59
COL2A1P02458 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
COL2A1P02458 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
COL2A1P02458 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 AC099654.3-201ENST00000447087 1546 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.13□□□□□ -1.59
COL2A1P02458 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
COL2A1P02458 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 AC027228.2-201ENST00000567141 2154 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL2A1P02458 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.13□□□□□ -1.59
COL2A1P02458 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC5.13□□□□□ -1.59
COL2A1P02458 SNORA63.1-201ENST00000362493 131 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 PMS1-202ENST00000374826 948 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 RNU6-233P-201ENST00000410845 141 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC5.13□□□□□ -1.59
COL2A1P02458 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL2A1P02458 RPS26P4-201ENST00000431743 355 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 AL353748.1-201ENST00000440753 474 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 AC114982.2-201ENST00000461396 358 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 RN7SL132P-201ENST00000478131 296 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC5.13□□□□□ -1.59
COL2A1P02458 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.13□□□□□ -1.59
COL2A1P02458 PGBD4P4-201ENST00000509673 613 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 MTND2P31-201ENST00000512602 616 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 AC099522.1-202ENST00000514718 367 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.13□□□□□ -1.59
COL2A1P02458 AC010547.7-201ENST00000570323 333 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.13□□□□□ -1.59
COL2A1P02458 MIR3944-201ENST00000581277 108 ntBASIC5.13□□□□□ -1.59
COL2A1P02458 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.12□□□□□ -1.59
COL2A1P02458 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL2A1P02458 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.12□□□□□ -1.59
COL2A1P02458 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL2A1P02458 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC5.12□□□□□ -1.59
COL2A1P02458 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL2A1P02458 RN7SKP202-201ENST00000410439 330 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 AL590806.1-201ENST00000415818 853 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 RPEP2-201ENST00000432149 701 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC5.12□□□□□ -1.59
COL2A1P02458 RPS7P7-201ENST00000463499 571 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 PARP4P3-201ENST00000510265 317 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 AC006499.6-201ENST00000511169 607 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 AC011853.2-201ENST00000526901 774 ntTSL 5 BASIC5.12□□□□□ -1.59
COL2A1P02458 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC5.12□□□□□ -1.59
COL2A1P02458 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.12□□□□□ -1.59
COL2A1P02458 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC5.12□□□□□ -1.59
COL2A1P02458 AC005034.4-201ENST00000603612 899 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 AL021368.1-201ENST00000607490 540 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 AC016252.1-201ENST00000609721 474 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.12□□□□□ -1.59
COL2A1P02458 AC091905.2-201ENST00000623143 306 ntBASIC5.12□□□□□ -1.59
COL2A1P02458 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL2A1P02458 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
COL2A1P02458 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.11□□□□□ -1.59
COL2A1P02458 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL2A1P02458 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL2A1P02458 AC097461.1-201ENST00000568928 2821 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.11□□□□□ -1.59
COL2A1P02458 RPS20P14-201ENST00000412545 360 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC5.11□□□□□ -1.59
COL2A1P02458 HMGN2P27-201ENST00000427352 270 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 TPTE2P1-204ENST00000435256 593 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 SDR42E1P3-201ENST00000438345 502 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC5.11□□□□□ -1.59
COL2A1P02458 AC108751.2-201ENST00000469993 231 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 RPL23AP2-201ENST00000471227 466 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
COL2A1P02458 ATP1B1P1-201ENST00000509767 915 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AC026726.1-201ENST00000512859 601 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 RNA5SP519-201ENST00000516480 119 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL2A1P02458 TRAV11-201ENST00000539512 339 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL2A1P02458 AC009137.2-201ENST00000568179 641 ntTSL 3 BASIC5.11□□□□□ -1.59
COL2A1P02458 AC122134.1-202ENST00000569111 1201 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AC017100.2-201ENST00000584628 355 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AC008739.3-201ENST00000603262 127 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 Z98200.1-201ENST00000607298 470 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AL021997.2-201ENST00000615674 271 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL2A1P02458 AC016542.2-201ENST00000624201 619 ntBASIC5.11□□□□□ -1.59
COL2A1P02458 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL2A1P02458 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC5.11□□□□□ -1.59
COL2A1P02458 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms