Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFP01375 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 AC008958.1-201ENST00000511047 682 ntBASIC4.27□□□□□ -1.73
TNFP01375 KCTD9P2-201ENST00000512203 1013 ntBASIC4.27□□□□□ -1.73
TNFP01375 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.27□□□□□ -1.73
TNFP01375 AC025884.1-201ENST00000556034 378 ntBASIC4.27□□□□□ -1.73
TNFP01375 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 AL133268.1-201ENST00000405676 1401 ntBASIC4.27□□□□□ -1.73
TNFP01375 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.27□□□□□ -1.73
TNFP01375 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.27□□□□□ -1.73
TNFP01375 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TNFP01375 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 C12orf45-204ENST00000552951 23529 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFP01375 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TNFP01375 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFP01375 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC4.26□□□□□ -1.73
TNFP01375 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TNFP01375 MIR1193-201ENST00000408109 78 ntBASIC4.26□□□□□ -1.73
TNFP01375 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFP01375 CEACAMP1-201ENST00000434624 1035 ntBASIC4.26□□□□□ -1.73
TNFP01375 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFP01375 TMEM246-AS1-204ENST00000450109 538 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFP01375 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFP01375 RPL23AP65-201ENST00000475608 468 ntBASIC4.26□□□□□ -1.73
TNFP01375 RN7SL41P-201ENST00000476144 297 ntBASIC4.26□□□□□ -1.73
TNFP01375 RPS4XP18-201ENST00000495480 763 ntBASIC4.26□□□□□ -1.73
TNFP01375 RFPL4AP5-201ENST00000514977 504 ntBASIC4.26□□□□□ -1.73
TNFP01375 RNA5SP49-201ENST00000516450 115 ntBASIC4.26□□□□□ -1.73
TNFP01375 OR10D4P-201ENST00000525892 951 ntBASIC4.26□□□□□ -1.73
TNFP01375 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFP01375 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.26□□□□□ -1.73
TNFP01375 AC021483.2-201ENST00000567415 758 ntBASIC4.26□□□□□ -1.73
TNFP01375 IMMP1LP1-201ENST00000605170 488 ntBASIC4.26□□□□□ -1.73
TNFP01375 AP002360.3-201ENST00000607673 710 ntBASIC4.26□□□□□ -1.73
TNFP01375 AC007546.2-201ENST00000623996 360 ntBASIC4.26□□□□□ -1.73
TNFP01375 FP325313.1-201ENST00000638228 703 ntBASIC4.26□□□□□ -1.73
TNFP01375 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
TNFP01375 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.26□□□□□ -1.73
TNFP01375 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
TNFP01375 AC091046.3-201ENST00000631455 1574 ntBASIC4.26□□□□□ -1.73
TNFP01375 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
TNFP01375 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
TNFP01375 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFP01375 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TNFP01375 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
TNFP01375 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 AC097374.1-203ENST00000400783 485 ntBASIC4.25□□□□□ -1.73
TNFP01375 RNA5SP36-201ENST00000410197 133 ntBASIC4.25□□□□□ -1.73
TNFP01375 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.25□□□□□ -1.73
TNFP01375 CDY14P-201ENST00000431260 1014 ntBASIC4.25□□□□□ -1.73
TNFP01375 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFP01375 CDY12P-201ENST00000440679 1015 ntBASIC4.25□□□□□ -1.73
TNFP01375 CDY13P-201ENST00000445813 1015 ntBASIC4.25□□□□□ -1.73
TNFP01375 CDY23P-201ENST00000451661 1014 ntBASIC4.25□□□□□ -1.73
TNFP01375 RPS7P7-201ENST00000463499 571 ntBASIC4.25□□□□□ -1.73
TNFP01375 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFP01375 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFP01375 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFP01375 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.25□□□□□ -1.73
TNFP01375 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFP01375 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 AC027455.1-201ENST00000574104 594 ntBASIC4.25□□□□□ -1.73
TNFP01375 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFP01375 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 AL160290.3-201ENST00000604869 165 ntBASIC4.25□□□□□ -1.73
TNFP01375 Z98200.1-201ENST00000607298 470 ntBASIC4.25□□□□□ -1.73
TNFP01375 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFP01375 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.25□□□□□ -1.73
TNFP01375 ZYXP1-201ENST00000617638 118 ntBASIC4.25□□□□□ -1.73
TNFP01375 MIR8059-201ENST00000620427 81 ntBASIC4.25□□□□□ -1.73
TNFP01375 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC4.25□□□□□ -1.73
TNFP01375 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.25□□□□□ -1.73
TNFP01375 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.25□□□□□ -1.73
TNFP01375 LARP1BP1-201ENST00000506036 1359 ntBASIC4.25□□□□□ -1.73
TNFP01375 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
TNFP01375 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
TNFP01375 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.24□□□□□ -1.73
TNFP01375 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.24□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 155 ms