Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC4.85□□□□□ -1.63
PDGFBP01127 AC016911.1-201ENST00000613297 452 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AL023881.1-201ENST00000621088 301 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 AC138965.3-201ENST00000623875 498 ntBASIC4.85□□□□□ -1.63
PDGFBP01127 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.85□□□□□ -1.63
PDGFBP01127 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
PDGFBP01127 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC4.85□□□□□ -1.63
PDGFBP01127 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.85□□□□□ -1.63
PDGFBP01127 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
PDGFBP01127 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 RNU6-666P-201ENST00000363499 107 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 SNORA62.3-201ENST00000365110 153 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 Y_RNA.333-201ENST00000365274 102 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 RNU6-152P-201ENST00000384037 107 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 SNORA5.1-201ENST00000384275 131 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 LRRC37BP1-201ENST00000398851 714 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AL358178.1-201ENST00000407698 397 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 SNORA11.2-201ENST00000408318 127 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.84□□□□□ -1.63
PDGFBP01127 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.84□□□□□ -1.63
PDGFBP01127 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFBP01127 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 RPS26P47-201ENST00000427219 348 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 BX276092.6-201ENST00000430476 250 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 PCBP1-AS1-237ENST00000452431 1194 ntTSL 4 BASIC4.84□□□□□ -1.63
PDGFBP01127 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFBP01127 AL691482.1-201ENST00000453255 87 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 BX276092.8-201ENST00000455722 250 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 METTL15P1-201ENST00000481421 1045 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AC105137.1-201ENST00000484355 562 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AC021087.2-201ENST00000504656 1203 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 AC108471.1-201ENST00000513977 287 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 RNU1-45P-201ENST00000517191 141 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AC010476.1-201ENST00000519111 851 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AC026616.1-201ENST00000523157 525 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 OR8R1P-201ENST00000543943 764 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.84□□□□□ -1.63
PDGFBP01127 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC4.84□□□□□ -1.63
PDGFBP01127 AC105129.1-201ENST00000560250 297 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.84□□□□□ -1.63
PDGFBP01127 AC009852.2-201ENST00000567898 485 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 IPO5P1-202ENST00000600039 287 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AC099676.1-201ENST00000608886 657 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 AL049794.2-201ENST00000616301 365 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 MIR6839-201ENST00000620425 113 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 AL118508.4-201ENST00000624142 1176 ntBASIC4.84□□□□□ -1.63
PDGFBP01127 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
PDGFBP01127 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
PDGFBP01127 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDGFBP01127 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
PDGFBP01127 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.64
PDGFBP01127 AC090971.4-201ENST00000560291 1800 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFBP01127 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDGFBP01127 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
PDGFBP01127 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFBP01127 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 RNU6-532P-201ENST00000384318 107 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFBP01127 AL512430.2-201ENST00000406786 339 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC140479.3-201ENST00000418944 1126 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AL356387.2-201ENST00000422272 243 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 AL132765.1-201ENST00000434165 553 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 ELOCP10-201ENST00000440624 327 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC023512.1-201ENST00000444513 499 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFBP01127 VN1R34P-201ENST00000447387 883 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AP002345.1-201ENST00000456493 928 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFBP01127 MTND4LP2-201ENST00000502312 285 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC108157.1-201ENST00000510511 539 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC111000.6-201ENST00000514471 709 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 MTND4LP31-201ENST00000514859 294 ntBASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms