Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC7.18□□□□□ -1.26
RAPGEF3O95398 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RAPGEF3O95398 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RAPGEF3O95398 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC7.18□□□□□ -1.26
RAPGEF3O95398 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 AL672167.2-201ENST00000377164 879 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 AL356968.2-201ENST00000412769 1257 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 AC079168.2-201ENST00000453977 416 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 TPT1P3-201ENST00000492841 512 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 RN7SKP265-201ENST00000516448 223 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 RN7SL176P-201ENST00000580352 264 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 IPO5P1-202ENST00000600039 287 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 AL512427.1-201ENST00000618593 349 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 AC241377.1-201ENST00000619797 406 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 AL078595.3-201ENST00000623815 1166 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 AC008432.1-201ENST00000615912 1320 ntBASIC7.17□□□□□ -1.26
RAPGEF3O95398 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 ST7-212ENST00000422922 1887 ntTSL 5 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
RAPGEF3O95398 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RAPGEF3O95398 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC021146.4-201ENST00000309229 279 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 RPL22P22-201ENST00000395439 379 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AF228730.1-201ENST00000397972 663 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 U3.32-201ENST00000408116 212 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 RPL23AP26-201ENST00000412728 464 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC011933.1-201ENST00000413334 321 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AL590399.2-201ENST00000427536 309 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 RPL7AP49-201ENST00000429522 581 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 AL591438.1-201ENST00000433508 581 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 RPL19P16-201ENST00000433839 588 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AL132765.1-201ENST00000434165 553 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 RPL7AP61-201ENST00000443410 636 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 MTND2P8-201ENST00000450555 1025 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC116533.1-201ENST00000459748 321 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC092691.2-201ENST00000461787 803 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 SYT14P1-201ENST00000481459 721 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 RPL36AP41-201ENST00000493820 306 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 NIFKP7-201ENST00000503365 834 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC021146.5-201ENST00000503544 545 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 MTND2P38-201ENST00000522536 667 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 NPM1P35-201ENST00000533043 868 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 AGGF1P5-201ENST00000567900 919 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 LINC02186-201ENST00000575767 885 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 CBX3P2-202ENST00000583365 535 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AP002802.2-201ENST00000605877 235 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 CYCSP41-201ENST00000616920 296 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 MIR492-201ENST00000638676 116 ntBASIC7.16□□□□□ -1.26
RAPGEF3O95398 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
RAPGEF3O95398 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
RAPGEF3O95398 SMG1P6-201ENST00000532337 2930 ntBASIC7.15□□□□□ -1.26
RAPGEF3O95398 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC7.15□□□□□ -1.26
RAPGEF3O95398 AC138907.8-201ENST00000623981 2256 ntBASIC7.15□□□□□ -1.26
RAPGEF3O95398 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.15□□□□□ -1.26
RAPGEF3O95398 MIR372-201ENST00000362225 67 ntBASIC7.15□□□□□ -1.26
RAPGEF3O95398 SNORA71.3-201ENST00000362582 128 ntBASIC7.15□□□□□ -1.26
RAPGEF3O95398 PPIAP31-201ENST00000405422 495 ntBASIC7.15□□□□□ -1.26
RAPGEF3O95398 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC7.15□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms