Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
PRKNO60260 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.53□□□□□ -1.68
PRKNO60260 MAPK10-338ENST00000641647 3362 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.53□□□□□ -1.68
PRKNO60260 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 RNA5SP87-201ENST00000384155 118 ntBASIC4.53□□□□□ -1.68
PRKNO60260 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.53□□□□□ -1.68
PRKNO60260 RNA5SP345-201ENST00000410646 108 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC002524.1-201ENST00000411687 547 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AL139128.1-201ENST00000413921 941 ntBASIC4.53□□□□□ -1.68
PRKNO60260 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 PNRC2P1-201ENST00000423940 420 ntBASIC4.53□□□□□ -1.68
PRKNO60260 DEFB130D-201ENST00000426866 237 ntBASIC4.53□□□□□ -1.68
PRKNO60260 RPS7P2-201ENST00000435134 607 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC006466.1-201ENST00000438721 289 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 AC069540.1-201ENST00000446320 988 ntBASIC4.53□□□□□ -1.68
PRKNO60260 EXOSC3P1-201ENST00000448649 500 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 AURKAPS2-201ENST00000454983 333 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC073636.1-202ENST00000457756 558 ntTSL 4 BASIC4.53□□□□□ -1.68
PRKNO60260 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 AC107398.1-201ENST00000486904 505 ntBASIC4.53□□□□□ -1.68
PRKNO60260 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 NPM1P35-201ENST00000533043 868 ntBASIC4.53□□□□□ -1.68
PRKNO60260 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.53□□□□□ -1.68
PRKNO60260 EDDM3DP-201ENST00000554692 434 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 AC010735.1-201ENST00000567305 1026 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 AC127024.5-201ENST00000580085 462 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 AL022067.1-201ENST00000602426 454 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AL445435.1-201ENST00000604232 665 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC140725.3-201ENST00000616193 880 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AL158062.1-201ENST00000619632 745 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.53□□□□□ -1.68
PRKNO60260 AC097655.1-201ENST00000635075 318 ntBASIC4.53□□□□□ -1.68
PRKNO60260 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.53□□□□□ -1.68
PRKNO60260 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.53□□□□□ -1.68
PRKNO60260 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.53□□□□□ -1.68
PRKNO60260 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 AC093849.1-201ENST00000563631 2209 ntBASIC4.53□□□□□ -1.68
PRKNO60260 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
PRKNO60260 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC4.53□□□□□ -1.68
PRKNO60260 AC100778.3-201ENST00000580060 1750 ntBASIC4.53□□□□□ -1.69
PRKNO60260 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 LIPF-203ENST00000394375 1470 ntTSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 RNA5SP187-201ENST00000384400 119 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AL035419.1-201ENST00000397037 564 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AP002784.2-201ENST00000397300 549 ntBASIC4.52□□□□□ -1.69
PRKNO60260 UBE2V1P9-201ENST00000414760 368 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AL590806.1-201ENST00000415818 853 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.52□□□□□ -1.69
PRKNO60260 AC006369.1-201ENST00000419425 548 ntTSL 3 BASIC4.52□□□□□ -1.69
PRKNO60260 AC007559.1-201ENST00000428736 355 ntBASIC4.52□□□□□ -1.69
PRKNO60260 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 AC023512.1-201ENST00000444513 499 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.52□□□□□ -1.69
PRKNO60260 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.52□□□□□ -1.69
PRKNO60260 CYCSP42-201ENST00000450823 238 ntBASIC4.52□□□□□ -1.69
PRKNO60260 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 AC098826.2-201ENST00000452011 651 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 RPS3AP6-201ENST00000484430 795 ntBASIC4.52□□□□□ -1.69
PRKNO60260 OR11I1P-201ENST00000486033 954 ntBASIC4.52□□□□□ -1.69
PRKNO60260 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 AL671862.1-201ENST00000515851 349 ntBASIC4.52□□□□□ -1.69
PRKNO60260 RNU6-276P-201ENST00000516114 96 ntBASIC4.52□□□□□ -1.69
PRKNO60260 RN7SKP141-201ENST00000516167 338 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.52□□□□□ -1.69
PRKNO60260 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.52□□□□□ -1.69
PRKNO60260 AC093249.4-201ENST00000564755 259 ntBASIC4.52□□□□□ -1.69
PRKNO60260 MIR4737-201ENST00000583979 81 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.52□□□□□ -1.69
PRKNO60260 SNX6P1-201ENST00000601728 1224 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 276.2 ms