Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 UBE2V1P1-201ENST00000430836 445 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.05□□□□□ -1.6
SMAD6O43541 TMX2P1-201ENST00000436507 708 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 AC012445.1-201ENST00000442831 607 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 KATNBL1P3-201ENST00000443475 909 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 Z80107.2-201ENST00000445127 392 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 RPS17P2-201ENST00000461663 408 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 SUMO2P5-201ENST00000506790 245 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 snoU109.6-201ENST00000516831 118 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 RNA5SP392-201ENST00000516905 112 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 AC010376.1-201ENST00000522101 334 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 HAUS1P3-201ENST00000523909 662 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 ZNF971P-201ENST00000562068 1249 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 MIR4480-201ENST00000582492 71 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 AC008752.1-201ENST00000590046 408 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 AC068790.2-201ENST00000602601 557 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AL358072.1-201ENST00000604156 575 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 OR7M1P-201ENST00000608946 533 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AC008759.3-201ENST00000613300 508 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 AC011330.2-201ENST00000621680 635 ntBASIC5.05□□□□□ -1.6
SMAD6O43541 LGI1-209ENST00000627699 664 ntTSL 3 BASIC5.05□□□□□ -1.6
SMAD6O43541 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.05□□□□□ -1.6
SMAD6O43541 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.05□□□□□ -1.6
SMAD6O43541 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
SMAD6O43541 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMAD6O43541 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC5.04□□□□□ -1.6
SMAD6O43541 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMAD6O43541 RN7SKP149-201ENST00000363008 344 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.04□□□□□ -1.6
SMAD6O43541 NCSTNP1-201ENST00000406229 144 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC073143.1-201ENST00000436316 395 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 MTND4P32-201ENST00000437189 1237 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AP000936.3-201ENST00000438127 255 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.04□□□□□ -1.6
SMAD6O43541 AL096829.2-201ENST00000446582 742 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 PTMAP3-201ENST00000447474 330 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 TPTE2P5-203ENST00000458118 728 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 RPL23AP56-201ENST00000460778 453 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 RPL32P14-201ENST00000463196 378 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC093663.2-201ENST00000484625 313 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC083982.1-201ENST00000485679 344 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC118465.1-201ENST00000513820 1271 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC007834.2-201ENST00000536310 343 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.04□□□□□ -1.6
SMAD6O43541 LSM3P2-201ENST00000551246 273 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.04□□□□□ -1.6
SMAD6O43541 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 AC011453.2-201ENST00000603737 729 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AL031320.1-201ENST00000604177 357 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC002487.1-201ENST00000604565 994 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC018695.5-201ENST00000605872 315 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AC100827.5-201ENST00000615883 426 ntBASIC5.04□□□□□ -1.6
SMAD6O43541 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
SMAD6O43541 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
SMAD6O43541 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC5.04□□□□□ -1.6
SMAD6O43541 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 94.9 ms