Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC124784.1-201ENST00000552426 571 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AL442163.2-201ENST00000553912 710 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 IGBP1P1-201ENST00000554337 1009 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC012616.1-201ENST00000600294 197 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 HCG18-243ENST00000602498 327 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC009027.1-201ENST00000604510 479 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AL499605.1-201ENST00000604628 403 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC069545.1-201ENST00000605671 358 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC080013.3-201ENST00000606839 578 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AL118522.2-201ENST00000616045 615 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 AC007490.1-201ENST00000624321 703 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.38□□□□□ -1.55
PHGDHO43175 DCAF13P3-201ENST00000561147 1334 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 AP005432.1-201ENST00000580891 3485 ntBASIC5.38□□□□□ -1.55
PHGDHO43175 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PHGDHO43175 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.38□□□□□ -1.55
PHGDHO43175 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PHGDHO43175 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 Y_RNA.169-201ENST00000363745 96 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 RNU6-560P-201ENST00000364007 108 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 RNU4-40P-201ENST00000364351 143 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 SNORD116-2-201ENST00000384274 95 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 SNORD116-6-201ENST00000384711 96 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 MIR92A2-201ENST00000385299 75 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 AL121878.1-201ENST00000418638 859 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC002069.1-201ENST00000429649 1159 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.37□□□□□ -1.55
PHGDHO43175 FMO7P-201ENST00000436045 768 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 SUMO2P3-201ENST00000438311 288 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 PPIAP17-201ENST00000438507 471 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 USP9YP22-201ENST00000438971 294 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AL450996.1-201ENST00000445574 1202 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 AL445665.1-202ENST00000452436 324 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.37□□□□□ -1.55
PHGDHO43175 RN7SL72P-201ENST00000460697 269 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 VPS26AP1-201ENST00000483197 979 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 RPS3AP22-201ENST00000488297 769 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC109481.1-201ENST00000509173 282 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 PDCL2P2-201ENST00000533651 189 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.37□□□□□ -1.55
PHGDHO43175 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC5.37□□□□□ -1.55
PHGDHO43175 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC008088.1-201ENST00000580993 280 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC006363.1-201ENST00000603806 463 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AP003973.1-201ENST00000604639 691 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AL133507.1-201ENST00000605269 557 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AC010245.2-201ENST00000606908 1167 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC5.37□□□□□ -1.55
PHGDHO43175 AL021707.7-201ENST00000607991 416 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AP004247.3-201ENST00000608682 624 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC5.37□□□□□ -1.55
PHGDHO43175 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC5.37□□□□□ -1.55
PHGDHO43175 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 MIR6778-201ENST00000617912 73 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 AC004777.1-201ENST00000624317 287 ntBASIC5.37□□□□□ -1.55
PHGDHO43175 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.37□□□□□ -1.55
PHGDHO43175 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PHGDHO43175 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
PHGDHO43175 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PHGDHO43175 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PHGDHO43175 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
PHGDHO43175 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms