Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC243772.1-201ENST00000451620 410 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXN3O00409 RN7SL174P-201ENST00000475578 289 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 SIAH1P1-201ENST00000479411 923 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 RPS4XP1-201ENST00000482189 787 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 IGBP1P5-201ENST00000507524 1000 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 RNA5SP228-201ENST00000516232 133 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 EIF1P6-201ENST00000600054 334 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC022022.2-201ENST00000602989 360 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC009237.15-201ENST00000610252 501 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXN3O00409 AC079395.3-201ENST00000615161 484 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC139769.3-201ENST00000618383 175 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC010975.3-201ENST00000618727 978 ntBASIC5.56□□□□□ -1.52
FOXN3O00409 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.56□□□□□ -1.52
FOXN3O00409 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.56□□□□□ -1.52
FOXN3O00409 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
FOXN3O00409 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FOXN3O00409 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXN3O00409 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXN3O00409 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXN3O00409 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 OR9K1P-201ENST00000326513 941 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
FOXN3O00409 SNORA67-201ENST00000384423 137 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 RNU6-549P-201ENST00000384433 107 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 MIR143-201ENST00000385300 106 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 U3.25-201ENST00000391209 220 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 NCSTNP1-201ENST00000406229 144 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 SNORA11C-201ENST00000408532 129 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 PCNPP4-201ENST00000414817 517 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 RPS3AP37-201ENST00000419176 745 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AL590609.2-201ENST00000421430 368 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 RAC1P8-201ENST00000427086 527 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 MTCO3P21-201ENST00000430791 643 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL391987.1-201ENST00000441025 200 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC009263.1-201ENST00000441193 1239 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL606490.1-201ENST00000452266 765 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL354710.1-201ENST00000453641 246 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC005229.2-201ENST00000456995 399 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC011225.1-201ENST00000457751 369 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC005410.1-202ENST00000460347 485 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 METTL15P1-201ENST00000481421 1045 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC069528.1-202ENST00000482888 637 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 RN7SL101P-201ENST00000496350 279 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FOXN3O00409 AL035404.1-201ENST00000497982 568 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 LINC00977-201ENST00000509893 1163 ntTSL 2 BASIC5.55□□□□□ -1.52
FOXN3O00409 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 SMARCE1P3-201ENST00000553649 1231 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL359219.2-201ENST00000555184 348 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC068714.1-201ENST00000559623 800 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC114947.2-201ENST00000565748 2125 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC090751.1-201ENST00000566966 267 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 GTSCR1-201ENST00000582578 470 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC113368.1-201ENST00000603736 382 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.55□□□□□ -1.52
FOXN3O00409 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC013470.4-201ENST00000619978 986 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.55□□□□□ -1.52
FOXN3O00409 AC017104.5-201ENST00000637647 639 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 AL049767.1-202ENST00000637826 242 ntBASIC5.55□□□□□ -1.52
FOXN3O00409 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
FOXN3O00409 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 85.6 ms