Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AC048351.1-201ENST00000420064 602 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 FAR2P4-202ENST00000425399 584 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AL353597.2-202ENST00000434901 373 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC073264.2-201ENST00000448886 166 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC089999.1-201ENST00000460336 374 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 RN7SL860P-201ENST00000473738 223 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC073073.1-201ENST00000493920 463 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC104071.1-201ENST00000505636 602 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 RN7SKP276-201ENST00000516242 268 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 RNU6-1308P-201ENST00000516817 103 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AP006289.1-201ENST00000538089 277 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC116553.2-201ENST00000564203 463 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AP000919.3-201ENST00000582591 568 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AL391358.1-201ENST00000605342 190 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AP003497.2-201ENST00000624220 967 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AL596275.2-204ENST00000641628 552 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AL596275.2-206ENST00000641957 626 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AL359715.4-201ENST00000606629 1436 ntBASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
NPIPA2E9PIF3 AC017002.4-201ENST00000604721 1525 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC011155.1-201ENST00000316512 456 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 RNA5SP505-201ENST00000364748 108 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 RNU6-40P-201ENST00000384254 107 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 MIR298-201ENST00000401212 88 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC119751.6-201ENST00000416712 186 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC092162.1-201ENST00000432828 434 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 ZFAND6P1-201ENST00000434138 605 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 MTND2P21-201ENST00000436242 1042 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC092013.1-201ENST00000438795 332 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC073052.1-201ENST00000440417 714 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AL691517.1-201ENST00000440833 1235 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC011753.3-201ENST00000443436 406 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AURKAPS2-201ENST00000454983 333 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 RPL23AP56-201ENST00000460778 453 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC025181.1-201ENST00000477507 416 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 HMGB1P3-201ENST00000502802 616 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC010627.1-201ENST00000503819 1294 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 SNORA26.10-201ENST00000516427 141 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 HIGD1AP18-201ENST00000520730 278 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC234771.5-201ENST00000600161 514 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AP000346.3-201ENST00000622821 210 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AL731566.1-201ENST00000620490 1937 ntBASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
NPIPA2E9PIF3 MAPK10-320ENST00000641462 6696 ntBASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 MACF1-203ENST00000361689 17538 ntTSL 5 BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 TBCAP2-201ENST00000416175 326 ntBASIC4.41□□□□□ -1.7
NPIPA2E9PIF3 QRSL1P2-201ENST00000418582 964 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 108.5 ms