Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 RPL7P50-201ENST00000600588 727 ntBASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 AL354984.3-201ENST00000604803 325 ntBASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 AC007546.2-201ENST00000623996 360 ntBASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC4.7□□□□□ -1.66
SMIM28A0A1B0GU29 CASC19-204ENST00000641001 2055 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 RNA5SP175-201ENST00000364275 119 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC004975.1-201ENST00000428733 208 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 RPEP2-201ENST00000432149 701 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 NUTF2P7-201ENST00000453086 375 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 ATP5G1P3-201ENST00000463301 410 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 RPL35P6-201ENST00000490024 372 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 HMGB3P14-201ENST00000494195 599 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC108475.1-201ENST00000507880 950 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC008958.1-201ENST00000511047 682 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 RFPL4AP3-201ENST00000515267 345 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 RNA5SP49-201ENST00000516450 115 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 NPM1P6-201ENST00000521088 871 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC025884.1-201ENST00000556034 378 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC009852.2-201ENST00000567898 485 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC027455.1-201ENST00000574104 594 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC020910.2-201ENST00000603635 610 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC012557.1-201ENST00000607115 611 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 Z98200.1-201ENST00000607298 470 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC097505.1-201ENST00000610199 565 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 FP325313.1-201ENST00000638228 703 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 MAPK10-303ENST00000641324 3959 ntBASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
SMIM28A0A1B0GU29 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AP001002.1-201ENST00000625148 1513 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 PEX12P1-201ENST00000400284 1048 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 MFSD13B-201ENST00000420133 1290 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AL157831.1-201ENST00000426134 473 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AL132765.1-201ENST00000434165 553 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 PPIAP13-201ENST00000434706 478 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AL512326.1-201ENST00000443050 721 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 SNORA31.9-201ENST00000516429 84 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 MRPL49P2-201ENST00000521066 465 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 RN7SL176P-201ENST00000580352 264 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 MIR4472-2-201ENST00000582069 67 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC107905.1-201ENST00000616204 426 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC068831.8-201ENST00000620171 435 ntBASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.68□□□□□ -1.66
SMIM28A0A1B0GU29 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 AC005261.4-201ENST00000600047 1385 ntBASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 GHR-213ENST00000622294 4312 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SMIM28A0A1B0GU29 MIR383-201ENST00000362257 73 ntBASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms