Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RNA5SP505-201ENST00000364748 108 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 GAPDHP15-201ENST00000398586 975 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 ZNF602P-201ENST00000405929 924 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 SNORA11F-201ENST00000408237 128 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RN7SKP16-201ENST00000410180 299 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 GJA6P-201ENST00000415117 1042 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 COX6B1P1-201ENST00000415962 213 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC009480.2-201ENST00000422916 432 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RHOT1P3-201ENST00000436571 331 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 TRIM60P9Y-201ENST00000438459 816 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 MED6P1-201ENST00000439659 713 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 TXNP5-201ENST00000441043 315 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RPS27P5-201ENST00000444247 244 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 TRIM60P11Y-201ENST00000445313 801 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 MTND1P33-201ENST00000446251 917 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 TCEA1P1-201ENST00000449716 880 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RPL10P17-201ENST00000453852 316 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AL139824.2-201ENST00000458731 1095 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RPL21P129-201ENST00000491732 478 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RNU6-276P-201ENST00000516114 96 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 RNA5SP230-201ENST00000517039 122 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 MTND2P38-201ENST00000522536 667 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 OR8G5-201ENST00000524943 1041 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 OR8K4P-201ENST00000534608 872 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 HMGN2P47-201ENST00000559378 272 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 MIR4270-201ENST00000581799 70 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 MIR4691-201ENST00000583764 85 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC011487.3-201ENST00000593607 453 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 LSM1P2-201ENST00000604911 322 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC245100.7-201ENST00000609678 442 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC006338.2-201ENST00000616864 791 ntBASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RAI2Q9Y5P3 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
RAI2Q9Y5P3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
RAI2Q9Y5P3 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AL031595.2-201ENST00000624215 19071 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 Z95331.1-201ENST00000623075 23112 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC092111.2-201ENST00000611627 1414 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 MFSD8-220ENST00000641243 1422 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC007382.1-201ENST00000624376 2618 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RNU6-481P-201ENST00000384194 107 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RNU6-298P-201ENST00000390888 96 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RNU6-796P-201ENST00000391086 107 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RPL22P22-201ENST00000395439 379 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AL049693.1-201ENST00000402760 611 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 SSR1P2-201ENST00000415208 787 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC013472.2-201ENST00000416226 306 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC119751.6-201ENST00000416712 186 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 FO393414.1-201ENST00000428697 1184 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 ELOCP11-201ENST00000436690 332 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RPS29P9-201ENST00000440360 171 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RPL7AP61-201ENST00000443410 636 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 ELOCP13-201ENST00000443934 329 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 ELOCP16-201ENST00000444494 332 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms