Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 RN7SKP224-201ENST00000364140 325 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 SNORD96B-201ENST00000386148 79 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 MIR921-201ENST00000401133 56 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 P2RY10P2-201ENST00000416730 913 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AL590609.2-201ENST00000421430 368 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 RPL21P43-201ENST00000425440 472 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 CCNB1IP1P2-201ENST00000432876 818 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 MTCYBP21-201ENST00000443300 1113 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AL935212.3-201ENST00000450729 284 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 CYCSP42-201ENST00000450823 238 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 MTND4LP2-201ENST00000502312 285 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 ATP6V1G1P6-201ENST00000504007 334 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AC022882.1-201ENST00000532142 501 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 HMGB2P1-201ENST00000591146 634 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 TEX41-238ENST00000604253 709 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AL133338.2-201ENST00000604292 736 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AC234782.5-201ENST00000617723 324 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 MIR6758-201ENST00000620653 63 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 AC138627.1-204ENST00000641894 765 ntBASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 BAALC-AS1-201ENST00000499522 1353 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CTNNA3Q9UI47 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AL391684.1-202ENST00000641293 1636 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 MAPK10-303ENST00000641324 3959 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AC006971.1-201ENST00000407916 4486 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 RNA5SP397-201ENST00000391323 118 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AL049697.2-201ENST00000403708 294 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 RN7SKP106-201ENST00000410832 272 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 RPL18P10-201ENST00000425606 538 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 RN7SL809P-201ENST00000482040 297 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 AL672167.1-203ENST00000641299 2975 ntBASIC5.49□□□□□ -1.53
CTNNA3Q9UI47 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 MT-RNR1-201ENST00000389680 954 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 OR1F12-201ENST00000402365 945 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 RN7SKP247-201ENST00000411094 308 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 CNOT7P1-201ENST00000429006 852 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 PTMAP3-201ENST00000447474 330 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AL162591.2-201ENST00000449634 317 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC005008.1-201ENST00000456151 612 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC103987.1-201ENST00000473394 348 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 RPL12P20-201ENST00000475538 479 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 snoU109.6-201ENST00000516831 118 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC009643.1-201ENST00000532030 391 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 MIR7703-201ENST00000620784 77 ntBASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CTNNA3Q9UI47 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms