Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 EIF2S2P2-201ENST00000447161 982 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 BUD31P2-201ENST00000449374 300 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 CCRL1P1-201ENST00000449542 1053 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 Z95152.1-201ENST00000453556 656 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 DNAL1-206ENST00000554871 632 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 MIR4277-201ENST00000578298 84 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC005191.1-201ENST00000603950 358 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC012409.3-201ENST00000611343 981 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 RMST_5.1-201ENST00000618704 126 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AP005019.3-201ENST00000620418 560 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 AC074140.1-201ENST00000621617 208 ntBASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CLCF1Q9UBD9 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.09□□□□□ -1.76
CLCF1Q9UBD9 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.09□□□□□ -1.76
CLCF1Q9UBD9 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 STX3-208ENST00000641815 3236 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 MAPK10-320ENST00000641462 6696 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 IGKV7-3-201ENST00000357453 298 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 BMS1P3-201ENST00000372011 932 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 U3.22-201ENST00000391120 215 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC136624.1-201ENST00000400791 413 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 Z95327.2-201ENST00000414579 1873 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 RPL12P34-201ENST00000424532 479 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 MTND4LP13-201ENST00000425022 298 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AL732292.1-201ENST00000426692 226 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 NMNAT1P2-201ENST00000435192 860 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 ARL5AP3-201ENST00000439327 386 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AL935212.3-201ENST00000450729 284 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 ISCUP1-201ENST00000454451 448 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 RPL7AP10-201ENST00000481016 791 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC025674.1-201ENST00000507074 324 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 HPRT1P1-201ENST00000509498 657 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AP000827.1-201ENST00000527814 258 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC079791.1-201ENST00000605356 973 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC007620.3-201ENST00000608131 497 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AL135786.2-201ENST00000608422 615 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC004241.3-201ENST00000611728 517 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AL121873.1-201ENST00000616013 524 ntBASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 LINC02109-206ENST00000629527 854 ntTSL 5 BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
CLCF1Q9UBD9 AC107068.1-201ENST00000563286 4218 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL022393.1-201ENST00000625142 1677 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL391684.1-202ENST00000641293 1636 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AC108751.5-201ENST00000492880 1336 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 RNU6-1251P-201ENST00000364502 107 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 SNORA62-201ENST00000365493 153 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 SNORD65-201ENST00000391079 73 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AC104297.1-201ENST00000393779 870 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL080315.1-201ENST00000406055 466 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 RPL7AP25-201ENST00000423357 805 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 RSL24D1P2-201ENST00000445584 366 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AC092905.1-201ENST00000467527 949 ntBASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
CLCF1Q9UBD9 AC015795.1-201ENST00000513669 327 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms