Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RHOT1P2-201ENST00000366423 333 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 MIR93-201ENST00000385024 80 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 CCL7-202ENST00000394627 696 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RNU6-603P-201ENST00000411403 107 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 CHEK2P3-201ENST00000416118 248 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 GAPDHP49-201ENST00000421421 961 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL21P43-201ENST00000425440 472 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 CENPIP1-201ENST00000425713 902 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL21P91-201ENST00000429231 479 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 MTCO3P21-201ENST00000430791 643 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RPS17P8-201ENST00000434525 335 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 MAPRE1P3-201ENST00000435438 796 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL31P20-201ENST00000449593 360 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 EIF4EBP2P1-201ENST00000450009 343 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 BX284632.1-201ENST00000478218 541 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 METTL15P1-201ENST00000481421 1045 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC008638.3-201ENST00000603341 463 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AL121932.1-201ENST00000605542 214 ntBASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CCNB1IP1Q9NPC3 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 ZFRP1-201ENST00000457579 2970 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 OR10J6P-201ENST00000289731 930 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 MIR105-2-201ENST00000385083 81 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 HSPD1P16-201ENST00000402302 394 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 IL6-206ENST00000407492 926 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC006065.1-201ENST00000422539 802 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 MTCYBP29-201ENST00000436327 1006 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC112498.1-201ENST00000444401 332 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 RPS27AP15-201ENST00000447672 466 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 RPL37AP8-201ENST00000494116 276 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC025164.1-201ENST00000496249 478 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC108471.1-201ENST00000513977 287 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 RNU6-347P-201ENST00000516658 105 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 VTA1P2-201ENST00000520205 911 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 EDDM3DP-201ENST00000554692 434 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AL158196.1-201ENST00000616786 434 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC016769.4-201ENST00000616893 535 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AC145207.9-201ENST00000623802 325 ntBASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
CCNB1IP1Q9NPC3 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms