Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RPL7P19-201ENST00000469948 618 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AP000827.1-201ENST00000527814 258 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 SETP1-201ENST00000556014 845 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL445567.2-201ENST00000618935 498 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 MTND5P12-201ENST00000502851 1449 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 BCLAF1P2-201ENST00000624956 2609 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RPS24P12-201ENST00000402084 394 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RPL21P65-201ENST00000406094 466 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP317-201ENST00000410176 116 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP311-201ENST00000411290 116 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 CDY14P-201ENST00000431260 1014 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 CDY12P-201ENST00000440679 1015 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 CDY13P-201ENST00000445813 1015 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 EEF1A1P1-201ENST00000447052 739 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 NUTF2P3-201ENST00000448540 384 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 CDY23P-201ENST00000451661 1014 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP315-201ENST00000516340 116 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 RNA5SP312-201ENST00000517068 116 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC027455.1-201ENST00000574104 594 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 AL109618.2-201ENST00000605527 211 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 MIR6867-201ENST00000610636 67 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 MIR492-201ENST00000638676 116 ntBASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
KIAA1549Q9HCM3 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AC139769.1-204ENST00000472297 1931 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 OR56B2P-201ENST00000317102 954 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 MIR195-201ENST00000385194 87 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 RPS27AP11-201ENST00000402798 447 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 RN7SKP235-201ENST00000410662 305 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 DNAJA1P1-201ENST00000425106 1187 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AL031584.1-201ENST00000447169 754 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 ATP5G1P3-201ENST00000463301 410 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 RPL35P6-201ENST00000490024 372 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AC010476.1-201ENST00000519111 851 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 MEG8-217ENST00000556637 924 ntTSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AL139041.1-201ENST00000605480 610 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AL023881.1-201ENST00000621088 301 ntBASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KIAA1549Q9HCM3 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 EOGT-210ENST00000615922 1931 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 ARAFP1-201ENST00000422172 605 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RPL34P6-201ENST00000432390 345 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 PPIAP13-201ENST00000434706 478 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RN7SL817P-201ENST00000480777 288 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RN7SL604P-201ENST00000492589 296 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RN7SL812P-201ENST00000493791 279 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 MTCO1P35-201ENST00000515270 228 ntBASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KIAA1549Q9HCM3 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms