Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 RN7SL814P-201ENST00000487715 300 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 RPL21P131-201ENST00000497298 483 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC115622.1-201ENST00000509628 587 ntTSL 3 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC104417.1-201ENST00000523974 751 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC027455.1-201ENST00000574104 594 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 MIR4284-201ENST00000578924 81 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC112220.2-201ENST00000605513 533 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC010632.3-201ENST00000611377 369 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC091932.2-201ENST00000623014 291 ntBASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
RTFDC1Q9BY42 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC100871.1-201ENST00000507871 1456 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 ENSAP3-201ENST00000312710 333 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 ANKRD36P1-201ENST00000344424 659 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 RNA5SP332-201ENST00000391063 115 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AL590290.1-201ENST00000405336 380 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC007557.4-201ENST00000421907 430 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 RPS27AP7-201ENST00000422792 455 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 EXOSC3P1-201ENST00000448649 500 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 TCEA1P1-201ENST00000449716 880 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC098826.2-201ENST00000452011 651 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC010326.1-201ENST00000462726 602 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 RN7SL443P-201ENST00000464331 290 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 RPS23P7-201ENST00000466210 444 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC079203.1-201ENST00000487972 404 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC136777.2-201ENST00000522979 358 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 GMFG-202ENST00000594700 397 ntTSL 2 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 ZNF92P3-201ENST00000596594 954 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 BNIP3P38-201ENST00000601117 544 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC020910.3-201ENST00000603701 874 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 MIR6758-201ENST00000620653 63 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 AC016717.3-201ENST00000624730 554 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 MTND4P31-201ENST00000425607 1343 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 SAMMSON-226ENST00000642089 1582 ntBASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.18□□□□□ -1.42
RTFDC1Q9BY42 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 UBE2Q2P1-202ENST00000354771 883 ntBASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 SNORD65C-201ENST00000390962 71 ntBASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 AL603865.2-201ENST00000401679 213 ntBASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC6.17□□□□□ -1.42
RTFDC1Q9BY42 AC138761.5-201ENST00000433967 325 ntBASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms